Gene
| Gene Model ID | pfu_aug2.0_364.1_14054 |
|---|---|
| Locus | scaffold364.1 : 201195 ... 216316 : + |
| To GenomeBrowser | scaffold364.1:201195..216316 |
| Genes list of scaffold | scaffold364.1 |
| Synonym | pfu_aug1.0_6687.1_45498 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| folylpolyglutamate mitochondrial-like isoform x1 | GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_364.1_14054.t1 | 1 | 1 | Mur_ligase_M | 74 | 222 | 2.8e-06 | 27.5 | 1.4e-09 | 1.1e-05 | 25.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_364.1_14054.t1 | gi|556968895|ref|XP_005993338.1| | PREDICTED: folylpolyglutamate synthase, mitochondrial isoform X1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_364.1_14054.t1 | gi|260789187|ref|XP_002589629.1| | hypothetical protein BRAFLDRAFT_284412 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_364.1_14054.t1 | gi|499022363|ref|XP_004561950.1| | PREDICTED: folylpolyglutamate synthase, mitochondrial-like isoform X1 [Maylandia zebra] | 0.0 |
| pfu_aug2.0_364.1_14054.t1 | gi|542189084|ref|XP_005470603.1| | PREDICTED: folylpolyglutamate synthase, mitochondrial-like isoform X2 [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_364.1_14054.t1 | gi|499022365|ref|XP_004561951.1| | PREDICTED: folylpolyglutamate synthase, mitochondrial-like isoform X2 [Maylandia zebra] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_364.1_14054.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_364.1_14054.t1 atgtcatccatcgtcagctcggcgtgtgcaattgatgcacatagaggatacgaggaggcagtgaaaaccctgaacacttt acagagtaacgcacagacaatagagaaaatgaggaaggaaagggataaaaagtcacatctcaatattcctaaaatgatca agtacgcacagagaactggcgtaacattagacgatatagacaatctaaatgtgatacatgtaagtggaaccaaaggtaaa ggatcaacatgtgctttctgtgaaagcattctacgtcaccatggatacaaaacagggtttttcagttctccacatttggt agaagtgagggagagatttaggataaatggacaaccaatctcccgatccatgtttgctgattatttttgggaggtttaca gtaaactgatcggtagcaaggacactgaggacagtggtggtatgccggcatattttgcatttttgacggtgatggccttc aacatgttcaagcaggaaaaggtagacgtggccattatagaggtcggaatcgggggccagtacgatagtaccaacctcat acgtaaacctgttgtgtgtggcgtcacatctctgggcctcgatcatgtgtccattctaggagaaactgtagagaaaatag cctggcacaaagctggtatattcaagcctggagtgcctgctttttcctcccctcagcaggagggtgccatgaaggtactg caggacagagccaatgaaattgggaaccgccttgatgtggtatcaccccttgctgagcgtgaccaggatggtaataagct acggctcggtatatgtggccatgtacagcagcataacgctgctcttgctgtacagctttgtaaaacattcatgaggacca gacgaaaaagcacgacacaagaagaatcagaaactgaccaaactaaaaacaaagacttaagtcaagatagcgatctggaa tcattacatacatcaaccaaaaaaggcttagagttatgtaggtggccaggtcgtacccaagtacttagacgtcctggact gacctattttctggatggggctcatactgtagaaagcatacagcaatgtgtagaatggtttcaggaagcctcagaaagag atacaagggaacacaaaggtagagttgctagagtggttgtatttaattctactggtgacagggatccttcatcactgata gaacctctcatggattgcgactttgatgcagcagtattctgtccaaatctagcatttgccacctctacatcagcagatac cactaatttgaccgttagcaaggaaagccagttaaacagagtattactcaataaacatgcctgggaaaaactcatggaaa agaggaaaaaatttagttatgataaaacagggtctaaaacagctgatgtctccacgcattatgatactggttctgatgta gatggcaagactaacgacattaacggaacagtgtgcactgctgacgacagaaaggactctcaagctatctgtgataaaca ttcaggtactgtaacacgtgaattctccagcatctatactgccttacagtgggccactcaagggagagaacttgctcttg atacggaaatagacttggaagaggaaatcccgtcacatctcagggacgtggaccatatacaagtattagtgacaggcagc ttacatcttgttggggggatactgggtgtggtgggaacaactaatgattaa |
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Protein
| Protein ID | pfu_aug2.0_364.1_14054.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_364.1_14054.t1 MSSIVSSACAIDAHRGYEEAVKTLNTLQSNAQTIEKMRKERDKKSHLNIPKMIKYAQRTGVTLDDIDNLNVIHVSGTKGK GSTCAFCESILRHHGYKTGFFSSPHLVEVRERFRINGQPISRSMFADYFWEVYSKLIGSKDTEDSGGMPAYFAFLTVMAF NMFKQEKVDVAIIEVGIGGQYDSTNLIRKPVVCGVTSLGLDHVSILGETVEKIAWHKAGIFKPGVPAFSSPQQEGAMKVL QDRANEIGNRLDVVSPLAERDQDGNKLRLGICGHVQQHNAALAVQLCKTFMRTRRKSTTQEESETDQTKNKDLSQDSDLE SLHTSTKKGLELCRWPGRTQVLRRPGLTYFLDGAHTVESIQQCVEWFQEASERDTREHKGRVARVVVFNSTGDRDPSSLI EPLMDCDFDAAVFCPNLAFATSTSADTTNLTVSKESQLNRVLLNKHAWEKLMEKRKKFSYDKTGSKTADVSTHYDTGSDV DGKTNDINGTVCTADDRKDSQAICDKHSGTVTREFSSIYTALQWATQGRELALDTEIDLEEEIPSHLRDVDHIQVLVTGS LHLVGGILGVVGTTND |
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