Gene
| Gene Model ID | pfu_aug2.0_366.1_20668 |
|---|---|
| Locus | scaffold366.1 : 98035 ... 136888 : - |
| To GenomeBrowser | scaffold366.1:98035..136888 |
| Genes list of scaffold | scaffold366.1 |
| Synonym | pfu_aug1.0_4013.1_37778 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nipped-b-like protein isoform x2 | GO:0003007 GO:0005515 GO:0005634 GO:0006357 GO:0007064 GO:0010604 GO:0030154 GO:0031325 GO:0032991 GO:0035136 GO:0044446 GO:0044702 GO:0044877 GO:0045892 GO:0048608 GO:0048638 GO:0048701 GO:0050877 GO:0051240 GO:0051716 GO:0060322 GO:0090596 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_366.1_20668.t1 | 3 | 1 | DUF155 | 23 | 48 | 4.7e-34 | 117.8 | 1.9 | 3900.0 | -2.5 |
| pfu_aug2.0_366.1_20668.t1 | 3 | 2 | DUF155 | 235 | 413 | 4.7e-34 | 117.8 | 2.2e-37 | 4.7e-34 | 117.8 |
| pfu_aug2.0_366.1_20668.t1 | 6 | 1 | Nipped-B_C | 364 | 437 | 4.3e-35 | 121.0 | 0.31 | 650.0 | -0.2 |
| pfu_aug2.0_366.1_20668.t1 | 6 | 2 | Nipped-B_C | 992 | 1014 | 4.3e-35 | 121.0 | 4.0 | 8500.0 | -3.9 |
| pfu_aug2.0_366.1_20668.t1 | 6 | 3 | Nipped-B_C | 1051 | 1079 | 4.3e-35 | 121.0 | 0.19 | 400.0 | 0.5 |
| pfu_aug2.0_366.1_20668.t1 | 2 | 1 | Cohesin_HEAT | 1072 | 1113 | 6.9e-15 | 54.6 | 5.1e-16 | 1.1e-12 | 47.6 |
| pfu_aug2.0_366.1_20668.t1 | 2 | 2 | Cohesin_HEAT | 1129 | 1144 | 6.9e-15 | 54.6 | 0.019 | 40.0 | 4.3 |
| pfu_aug2.0_366.1_20668.t1 | 6 | 4 | Nipped-B_C | 1142 | 1216 | 4.3e-35 | 121.0 | 0.69 | 1500.0 | -1.4 |
| pfu_aug2.0_366.1_20668.t1 | 3 | 3 | DUF155 | 1459 | 1516 | 4.7e-34 | 117.8 | 0.84 | 1800.0 | -1.4 |
| pfu_aug2.0_366.1_20668.t1 | 6 | 5 | Nipped-B_C | 1553 | 1634 | 4.3e-35 | 121.0 | 2.3e-29 | 4.8e-26 | 91.5 |
| pfu_aug2.0_366.1_20668.t1 | 6 | 6 | Nipped-B_C | 1637 | 1669 | 4.3e-35 | 121.0 | 8.1e-11 | 1.7e-07 | 31.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_366.1_20668.t1 | gi|524866560|ref|XP_005090101.1| | PREDICTED: nipped-B-like protein B-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_366.1_20668.t1 | gi|676454140|ref|XP_009053583.1| | hypothetical protein LOTGIDRAFT_214826 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_366.1_20668.t1 | gi|585679353|ref|XP_006819500.1| | PREDICTED: nipped-B-like protein-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_366.1_20668.t1 | gi|260784421|ref|XP_002587265.1| | hypothetical protein BRAFLDRAFT_173657 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_366.1_20668.t1 | gi|731269046|ref|XP_010603783.1| | PREDICTED: nipped-B-like protein isoform X2 [Fukomys damarensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_366.1_20668.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_366.1_20668.t1 atggcaaaagtacttggattcacgtataaaatatcgacatctaccatcaagtcaggggcatccaggattaacaatgtgat ttcatcccagagatattgcacaaatcagaaacattcactatcaacatctctctgtagatcaatatgtgcaaactcttgca aacaagttagaactacaccagattttaatatcttaccttcaaggtcacggacacttttgaacatggacataataaagaac tgttgtacctacaacgcccacagtttgtttaatttagaaatgcactgtaagcgttcacaaagttcaaggacaaatttaaa tatgtcagtagcaaaaaactacagttcattagctatgtcaccaggaatatgtacaaaatattcaagagaagggaaaatgt tttattaccaatgtttccacagtgatagaactttacagttacccacatcaactccaagaaaggttctagatattaaacct ccaccaaagaagaagaaaaagaaaaaaatgccacctaaattaaaggaaggaaataagaaagtagtggcttatgctacggc agaggaatatgacatagagaagctcaggatgacactagattcccaaggatggtataatctgacacccttacatcaagtgt catcagaaatgggtgatgtcctgcatgccacacccaagtacccagtttcagaacatgaaaaagaaattcttctatttgag aatggtactgtggtgttctgggatgtacctgacactgagattacagaggtgatcaagtttctcagattccatggaaatgg gacgtatgacattgacctgagcaatgcagaaatagaaagcatggaattcaatctcgtcaaaaatcagcagacgggtttgt ttaaaaatgttctggtgctgaacatggagggtaacaaccctgaggggaaggaacagatgtttctggagaaatatacatgt tcaaatatcctctcacagtcagtaaagttagccatttgggagtttgaagccgacaaatttgtagaggaaatggtggaact aacagagaatttaagggaaggaaaagggatcggaatgaagagaaaagatgtattaaggaacattggaacagcatatgagt ttagacataatatacatcgttctgaccttgaggacacccctgatttctactgggacagagaagagctagaattactatat aacagactgtataattcatttgccattaaaaaacgtactgttttttattttgtatgtaatgttctagatgtaaagaagaa gaaaaaagagaagaggcatcggagaattaatcagaatgctttatctgtggaagaactacttgacagtccaacgtttaaaa agtttagcagctgtatggaaggcatcctggagactgctgaggatatcaactttggttctctagacccaagtaatgatgaa acagagtgcccaccagaaacattgatctccagaggtgttctctcagacctctgtggtgagactgccaaactaaaaactct cggagttctaaatcaggtgccagcagataggctagtaaagctccttacagttctacagtggaacatcagagatggcacca aagtctcacctttaataggccaagtggaggatgaggatgatgaagaacagaggttatggagagaggtgaccatggagcgt gtaatgagaagtatggaatctgctctaactgccctctatatcatgacgtcaccagacatgcctaaacaagtgtacataga ggatgttatagagagaattatcctctttggaaagttccagctacaaaatactatttttcctgaatttgatcctgtataca ggattgatccaaaagcaaaagatggttaccatggaagccttaaagctaagagagccagagcatctcaagtcaaacacaaa tctacaatatcactgtacaacaagatctcagatatgatcagcaacctagctgagcttgtttatgttcaagagctaacaga taccaccattttacaggtttcaacacttggtgtttcaccattctttgttgaaaatataagtgagatgcagctaaactctt tgaagttggttaccactgtattttctaagtatgaaaagcacagacaactgattttagaagatatttttgcaagcttagcc agactaccttcaagcaaaaggaatctgagaaattataggttgaattctgaggagtctattcagatggtgacggccctagc gttacagctgatccagtgtgttgttatcctgccgtctagtagcttacaggacacaaatatagaggatgaggaatctctac agtcatcaaaacaaaaactaaaaagacaggctgatcatgatgtaacaattgtcacatccttcgagaatgctttgagaacg gggcacaattttctcagtgttttcttgaaaaaatgtacaactaaaggtgaagaagattaccgtccaatgtttgagaactt tgtacaggatctattatctaccgtcaataaaccagagtggccctcctcagaactgcttcttagtcttctcggaaggattc tggtatcccagttcagtaataaatccaccgatatgtcacagcgtgtagcatcgttagagtacttaggtatcgtagcatca agattacggagggatgccgtctctagtcaagacaatcaggaaacagttgatgaaatcattgctaaggtaaatgcagaaga cagtgatgaggaagagatcatgaaaagatccacaagagcaagaaaatcagactcaccagtatctgaaatggaggaccaga ctcaagtgttacagaaggccatgttagactacctggcccatcactgtaagagtgaatcagcttactggtatgcaaggttg ttctatattgcacaatggtacagagatgtaaatcttgagttagagagaaccatgaaaggtggaggggatgccgacatggg gggtcagatgaccagtgaagtcatagaaaacgcagaaaaaaggaaaaagttcctcttagaaatggcagagctatcctcaa aacctactgcaaacttcaagccaccctcaaccaagcttgattacgacaatgcatgtcttgctgccagatatttatcctcc aagaggccttttgccaagagttttgactactatcttactcagattttacgagtgttatgtgagacagctgtggcagtaag aaccaaagcaatgaaatgtttaactgctgttatagaagctgatcctggcattttagcaagggatgatatgaagcaaggtg tacatgccagatttcttgaccagtctacgtctgtgagagaagcagctgttgagttagtaggaagatttatcttaatccgt ccagaacttattcctacttactacgacatgctctcagaaagaatacttgacacaggtataagcgtgcggaagagagtgat aaagatcttcagggatatttgtgtagagcattcagatttccaaaaaattccagaaatctgtgtcaaaatgatcagacgag tcaatgatgaagagggcataaagaaactggtgaatgaggttttccagacgatgtggtttacaccattgagtaccagagac aaagattctacgaagttattaacccgagtcatcaatatcacagaagtggtagcagcctgtagagacactggatacgagtt ttttgagcagttactagaaaaccttttgaagaaagatgaagatgggaacttcaacaaaagtgctgtgacgtcatgtcgcc agatagtggactgcttggtggaaaatgttctaacattagaagaaaaggctgttgacatggaggccagaaaaggttgtagc actcgtcttgtggccagtctgtcaacattgtacctcttcagtaaaatcaaaccagatctcatggttaaacatgccataac actacaaccatacctggacatcacctgtcagaatcaggcagactaccaagtattacagaatgtagccaggattctggagg tggtgattccactaatggttcatcccagtgagctgttcttggcccaggttgaggaggatatggtcaaacttatcctcaaa catggaatgaaggtggttcagagttgtgtgagctgtcttggtgctgtagtcaattgtgttagtcataattatgccttggt gaaagattgttttcacaagttttttggttgtttgttacggtttatggctgagcataaaaatgatccgacaagtccctctc gggaaagaaaaccaactttactcaggtctttgttcaccactggtttactgtgtaaaaactttgactttgatgccaaagaa ttgggagacccaaagtattcagttaaggacagggtgtttgaagttctagtctactttgtgaaccatgacgatgaagctat taaagaaatggctctttcgggattagggtccatggcaatacggcattttgaggtcatgttaggacaagaaatgaagacga tgtatttcaattttcttgaaaaagaaaagagttcattaaaactgaaaatccaggtgttgaaaaatttgcagcaatatttg ttagaagaggaggtcaggatgcataaggcagacgcagagtggaagaagcatgcaaaggaagaagatttaaaagaaatggg agatgtgcaatcagggatggccagtacaattatgcaagtgtacctgacaaaagtgctggactcgtttttccacagtcagt tccaagtgcggctttctgctttaagtgtgataaacttggtgctacaacaaggacttgttcatccagtacagtgtgtgcca tatttaattagcatgtgtacagatgaagaacaaagtatacgggttaaagctgatcagcagctacaagagatagagaagca gtatccaggcttcatccatagaatctcattacaagaacaagtgtatatagcagataatttagcatttttcccataccaaa ctcaggacgaaccattattcatcattcatcagatagatattatagtctcagtagctggatctaatcttcttcagtctttc aaagagggtatgacaaatggagaacagcagcatatggtatatgatgatgacgatgatgacccagaaaaactcattgagac tgtattagaggtactgacggagaaacgatacgatccagatagtgtagacgatgacatgagagacaaggttgtcacagatt atttagagttcaaagacttgatggagagtatagacccacctgatgaagacgaggaggaggataacagaagtacaggagga cagacccctaaccctgggagggtaacgcccaccccaggcagggtcacacccacctcaggtagagtcacacccacccctgg tagacacacccccactccaggcagcagatctcccagggtaggtgtaaacgtcacacctgaggaaggtgtaggagaaacaa cggagatacatgtagctaatggtggagaagatactgcaattgttatagagaatgaagaaaacgcagcagatgataaggtg gaagataaacgtagagttccacctattaaaatcaaaacctcacatcactttaacacaccaaggacttcacgtcatcaaca tttattcactgtagataaaagaaaaattccattacaaacttcatcaaatagaaacttctgcaagtcattaaatgcatctc atagtggtcataggacgtcttcatctaaaaaacaaaaatctcataaaaaacgcaagaaaagatacggtagtgatagtgaa gaagacagtgactatggtgaacaggaggttagatcgtcaaaaaagaaagccaagaagaagcggaaacgttacggtagtga ctcggatgacgatagtgatgaagatccagatttctgcttatag |
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Protein
| Protein ID | pfu_aug2.0_366.1_20668.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_366.1_20668.t1 MAKVLGFTYKISTSTIKSGASRINNVISSQRYCTNQKHSLSTSLCRSICANSCKQVRTTPDFNILPSRSRTLLNMDIIKN CCTYNAHSLFNLEMHCKRSQSSRTNLNMSVAKNYSSLAMSPGICTKYSREGKMFYYQCFHSDRTLQLPTSTPRKVLDIKP PPKKKKKKKMPPKLKEGNKKVVAYATAEEYDIEKLRMTLDSQGWYNLTPLHQVSSEMGDVLHATPKYPVSEHEKEILLFE NGTVVFWDVPDTEITEVIKFLRFHGNGTYDIDLSNAEIESMEFNLVKNQQTGLFKNVLVLNMEGNNPEGKEQMFLEKYTC SNILSQSVKLAIWEFEADKFVEEMVELTENLREGKGIGMKRKDVLRNIGTAYEFRHNIHRSDLEDTPDFYWDREELELLY NRLYNSFAIKKRTVFYFVCNVLDVKKKKKEKRHRRINQNALSVEELLDSPTFKKFSSCMEGILETAEDINFGSLDPSNDE TECPPETLISRGVLSDLCGETAKLKTLGVLNQVPADRLVKLLTVLQWNIRDGTKVSPLIGQVEDEDDEEQRLWREVTMER VMRSMESALTALYIMTSPDMPKQVYIEDVIERIILFGKFQLQNTIFPEFDPVYRIDPKAKDGYHGSLKAKRARASQVKHK STISLYNKISDMISNLAELVYVQELTDTTILQVSTLGVSPFFVENISEMQLNSLKLVTTVFSKYEKHRQLILEDIFASLA RLPSSKRNLRNYRLNSEESIQMVTALALQLIQCVVILPSSSLQDTNIEDEESLQSSKQKLKRQADHDVTIVTSFENALRT GHNFLSVFLKKCTTKGEEDYRPMFENFVQDLLSTVNKPEWPSSELLLSLLGRILVSQFSNKSTDMSQRVASLEYLGIVAS RLRRDAVSSQDNQETVDEIIAKVNAEDSDEEEIMKRSTRARKSDSPVSEMEDQTQVLQKAMLDYLAHHCKSESAYWYARL FYIAQWYRDVNLELERTMKGGGDADMGGQMTSEVIENAEKRKKFLLEMAELSSKPTANFKPPSTKLDYDNACLAARYLSS KRPFAKSFDYYLTQILRVLCETAVAVRTKAMKCLTAVIEADPGILARDDMKQGVHARFLDQSTSVREAAVELVGRFILIR PELIPTYYDMLSERILDTGISVRKRVIKIFRDICVEHSDFQKIPEICVKMIRRVNDEEGIKKLVNEVFQTMWFTPLSTRD KDSTKLLTRVINITEVVAACRDTGYEFFEQLLENLLKKDEDGNFNKSAVTSCRQIVDCLVENVLTLEEKAVDMEARKGCS TRLVASLSTLYLFSKIKPDLMVKHAITLQPYLDITCQNQADYQVLQNVARILEVVIPLMVHPSELFLAQVEEDMVKLILK HGMKVVQSCVSCLGAVVNCVSHNYALVKDCFHKFFGCLLRFMAEHKNDPTSPSRERKPTLLRSLFTTGLLCKNFDFDAKE LGDPKYSVKDRVFEVLVYFVNHDDEAIKEMALSGLGSMAIRHFEVMLGQEMKTMYFNFLEKEKSSLKLKIQVLKNLQQYL LEEEVRMHKADAEWKKHAKEEDLKEMGDVQSGMASTIMQVYLTKVLDSFFHSQFQVRLSALSVINLVLQQGLVHPVQCVP YLISMCTDEEQSIRVKADQQLQEIEKQYPGFIHRISLQEQVYIADNLAFFPYQTQDEPLFIIHQIDIIVSVAGSNLLQSF KEGMTNGEQQHMVYDDDDDDPEKLIETVLEVLTEKRYDPDSVDDDMRDKVVTDYLEFKDLMESIDPPDEDEEEDNRSTGG QTPNPGRVTPTPGRVTPTSGRVTPTPGRHTPTPGSRSPRVGVNVTPEEGVGETTEIHVANGGEDTAIVIENEENAADDKV EDKRRVPPIKIKTSHHFNTPRTSRHQHLFTVDKRKIPLQTSSNRNFCKSLNASHSGHRTSSSKKQKSHKKRKKRYGSDSE EDSDYGEQEVRSSKKKAKKKRKRYGSDSDDDSDEDPDFCL |
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