Gene
| Gene Model ID | pfu_aug2.0_366.1_20670 |
|---|---|
| Locus | scaffold366.1 : 163068 ... 179628 : - |
| To GenomeBrowser | scaffold366.1:163068..179628 |
| Genes list of scaffold | scaffold366.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_366.1_20670.t1 | 1 | 1 | FCH | 10 | 98 | 1.0e-21 | 76.8 | 1.6e-24 | 3.0e-21 | 75.4 |
| pfu_aug2.0_366.1_20670.t1 | 2 | 1 | SH3_2 | 209 | 224 | 7.2e-06 | 25.3 | 0.45 | 840.0 | -0.5 |
| pfu_aug2.0_366.1_20670.t1 | 2 | 2 | SH3_2 | 323 | 374 | 7.2e-06 | 25.3 | 2.5e-08 | 4.5e-05 | 22.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_366.1_20670.t1 | gi|676460415|ref|XP_009055615.1| | hypothetical protein LOTGIDRAFT_105043 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_366.1_20670.t1 | gi|551493544|ref|XP_005798340.1| | PREDICTED: proline-serine-threonine phosphatase-interacting protein 1-like [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_366.1_20670.t1 | gi|658855762|ref|XP_008410528.1| | PREDICTED: proline-serine-threonine phosphatase-interacting protein 1-like isoform X1 [Poecilia reticulata] | 6.02558e-44 |
| pfu_aug2.0_366.1_20670.t1 | gi|340380376|ref|XP_003388698.1| | PREDICTED: proline-serine-threonine phosphatase-interacting protein 1-like [Amphimedon queenslandica] | 9.94922e-44 |
| pfu_aug2.0_366.1_20670.t1 | gi|658855765|ref|XP_008410529.1| | PREDICTED: proline-serine-threonine phosphatase-interacting protein 1-like isoform X2 [Poecilia reticulata] | 9.94922e-44 |
Transcript
| Transcript ID | pfu_aug2.0_366.1_20670.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_366.1_20670.t1 atgcagcataataaactgagatatagagattcgttttgggagccggacttgacaagtcctatgggatttgaggctctttc ccgacggatgaaagaagggaaaaccttttgtaacgacgtaagggatttcttcaaacaaagggcaaagatagaaaaacagt actacacagacttacagaaactagcagagtccagcaagtttaaaactgaacttggagatttggaaaaagcgtggagggaa ctcaaaaatgaaactgagaaaactgctcaggcacacgagaaggcatcgaaagacttcgaaagactaggacaagaagacat agtagtaaaagcccacaattgtgtaaagtcagcatattcgaaagcaaaaaatcaagaaaaggtttttcacaagaagtgcg aagagtgggacgaattacaaaaccaagtcaagtttaacaccaacaataataacaatatgaacacgaaggatttcgataaa ctcaaggtgaaagaaattaaggccaaagaggacatggagaaaaatgacaatatttacaagaacttgattgaggaagtcca aagagcaaagcaaacatgggagggtgactttgagcacatgtgtgatattttccaaacattagacgagaaaagaatagagc acgtccgtgattggatgtggaagtgtacaaacgttgactcacagacatgcgtggaccaagacgatagttgtgagagagta cggaactctctagaaagatgtgatattactgcagacacgaaccattttgttagcatgtacaaaacaggcgaaaggaaacc accaccctttcagtatgcaacattagggaaactttcagtcaataggacgctgtcaaattctcccggtcttccacctcctc ccaacagacccccgccccatccgaaagacgcaacatacgcagaaatttcagattcccataggagctgtatcacgtcagat gatcatatagccgttatgaactataaaccaaagcaaaaaggtgagatcgccatgactacaggagaccatatagcagttct gagacgaatggaggacaacggtatggtgtttgtacataacacacgtaccaaggaaagtggttatgttcccatgggcaata tggaactcaaagactgctcagcattctctttttga |
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Protein
| Protein ID | pfu_aug2.0_366.1_20670.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_366.1_20670.t1 MQHNKLRYRDSFWEPDLTSPMGFEALSRRMKEGKTFCNDVRDFFKQRAKIEKQYYTDLQKLAESSKFKTELGDLEKAWRE LKNETEKTAQAHEKASKDFERLGQEDIVVKAHNCVKSAYSKAKNQEKVFHKKCEEWDELQNQVKFNTNNNNNMNTKDFDK LKVKEIKAKEDMEKNDNIYKNLIEEVQRAKQTWEGDFEHMCDIFQTLDEKRIEHVRDWMWKCTNVDSQTCVDQDDSCERV RNSLERCDITADTNHFVSMYKTGERKPPPFQYATLGKLSVNRTLSNSPGLPPPPNRPPPHPKDATYAEISDSHRSCITSD DHIAVMNYKPKQKGEIAMTTGDHIAVLRRMEDNGMVFVHNTRTKESGYVPMGNMELKDCSAFSF |
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