Gene
| Gene Model ID | pfu_aug2.0_366.1_20672 |
|---|---|
| Locus | scaffold366.1 : 190049 ... 211774 : + |
| To GenomeBrowser | scaffold366.1:190049..211774 |
| Genes list of scaffold | scaffold366.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein nap-like isoform x2 | GO:0005743 GO:0019233 GO:0042165 GO:0097060 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_366.1_20672.t1 | 2 | 1 | NIPSNAP | 8 | 88 | 3.7e-36 | 123.1 | 8.2e-10 | 1.2e-05 | 25.1 |
| pfu_aug2.0_366.1_20672.t1 | 2 | 2 | NIPSNAP | 101 | 198 | 3.7e-36 | 123.1 | 6.0e-32 | 8.8e-28 | 96.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_366.1_20672.t1 | gi|260799720|ref|XP_002594832.1| | hypothetical protein BRAFLDRAFT_124430 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_366.1_20672.t1 | gi|390356313|ref|XP_797656.3| | PREDICTED: protein NipSnap homolog 2 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_366.1_20672.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_366.1_20672.t1 atggagcaatatctgaaagagtttggctatttccagcagttgatgcatgagaaaggtgctggtgccagtttggttggcag ctttacggtagaaatcggtgatcaggatgaagcaatccatatatggagttataagggagggtatcctgtcttaaatagag ctagagaattatatagaacagataaggactttattcaatacagattgaacagaaataaaatgctacgagccaggaagaac cagattctcttagccttcagtttttggccggagcctcaggcacgggacggaaatcacatttatgaaatgagaagttacac attaaagccagggactattttagagtgggcaaataattgggcaaaaggtattcagcatcgattagaaaatgaggaagcag tatgtggactcttctctcaaattggagaccttaacactgtccatcatgtgtggggttacaaagatctacagacacgtaag gagacaagagaaatggcgtggagtaagccaggatgggacgattgcgtagcttatacagtgccattaatacgtcacatgca gtctcggatccttattcccacaccattctcgcctgtacaatag |
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Protein
| Protein ID | pfu_aug2.0_366.1_20672.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_366.1_20672.t1 MEQYLKEFGYFQQLMHEKGAGASLVGSFTVEIGDQDEAIHIWSYKGGYPVLNRARELYRTDKDFIQYRLNRNKMLRARKN QILLAFSFWPEPQARDGNHIYEMRSYTLKPGTILEWANNWAKGIQHRLENEEAVCGLFSQIGDLNTVHHVWGYKDLQTRK ETREMAWSKPGWDDCVAYTVPLIRHMQSRILIPTPFSPVQ |
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