Gene
| Gene Model ID | pfu_aug2.0_366.1_20673 |
|---|---|
| Locus | scaffold366.1 : 211778 ... 224418 : - |
| To GenomeBrowser | scaffold366.1:211778..224418 |
| Genes list of scaffold | scaffold366.1 |
| Synonym | pfu_aug1.0_21719.1_04172 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_366.1_20673.t1 | 2 | 1 | ABC_tran | 5 | 133 | 4.1e-20 | 72.4 | 2.5e-23 | 9.3e-20 | 71.3 |
| pfu_aug2.0_366.1_20673.t1 | 2 | 2 | ABC_tran | 237 | 256 | 4.1e-20 | 72.4 | 2.0 | 7400.0 | -2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_366.1_20673.t1 | gi|260790945|ref|XP_002590501.1| | hypothetical protein BRAFLDRAFT_86172 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_366.1_20673.t1 | gi|751234422|ref|XP_011170941.1| | PREDICTED: ABC transporter G family member 21 [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_366.1_20673.t1 | gi|676455434|ref|XP_009054004.1| | hypothetical protein LOTGIDRAFT_116996 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_366.1_20673.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_366.1_20673.t1 atgctcgttgaaggttcaggaaagacaactcttctgaataccttgtcaggacagattcctgcagatcatggtacagtcat attgaatgataacatcatgacgaaggcagcacgacgtagcattggttattgtatacaggaggatattttcctcgccaacc ttactttgtacgaaaccctgtatttcacagcaatgttaagaattcctgaaaatgtaccatacagcgagaaacttgccaaa attaatgagacagttgaagctttgaatttggcagattgtgtgaaaacaaagataggagatttcttagatcgtggactttc aggaggagagaagaaacgtgccaacatcgcttgtgaacttcttacagatcctgatattctacttgtagatgagccaacaa caggtttagattcaagcaccgccctacttatgatgcaacaactgacaagctacgctaatgtgcatgataaaattgtaata ataactatacatcagccttctagtcagatgttccgtaccttaaacaagcttctactgttggtgaatggtcaaacagctta tttcggcaatgctcaagatgcagtgaggtattttcaaccgctcaatgttccacaaaggcagatgtataaccccgctgact acctcatggaacttttgacagcagacgatcgttttatcgatcaaatccacctcttggcatcaaacaaaagacaggaagaa gcctttatgacaaagcagaatcactctcatcatcaacaaaccattattagtaaatccaatgaacattcagatggattttc aaaacaagctgagtgcgatataacagaagtagtgttccatgacaacctagataacaattcacacggaaagatctggccaa ctactttctggacccagtattatctattaacatggagaaacttcaagcaagtaaaggggaggctatttcgagttcctttg acattgcccgtcctatggacagctctaatattaggaatgatgtattttcatatatctaaggagttggacacactgcgcga taggatgggaatgggagttggacatgtatttggagctctcatatttgatgctagcacagctgttacatcctcacagacgt tcaacatatgtgcattcttagctgctggaatgttcacaactcatttccctccttggttaacttggtttaaatacctatct ttcatgcattatccgtatgctgccatggtaacatctatactatctgacgtcactcccataccatgtaacaatacagcagc aaacacatttgaagtctgtaagacatcagaatacctgacaggaaaagacatacttacaagttatggtgtggaactgccaa tttactgttacttagcaacacttacaattatcatattcttgttaaaagtgttgttggagaacccctccatgcagtacatg ttggtgttgcaactaggtgttgttggagaacccctccatgcagtgaatgttggtgctgcaactacgtgttatggagaccc tcctttcttctaa |
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Protein
| Protein ID | pfu_aug2.0_366.1_20673.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_366.1_20673.t1 MLVEGSGKTTLLNTLSGQIPADHGTVILNDNIMTKAARRSIGYCIQEDIFLANLTLYETLYFTAMLRIPENVPYSEKLAK INETVEALNLADCVKTKIGDFLDRGLSGGEKKRANIACELLTDPDILLVDEPTTGLDSSTALLMMQQLTSYANVHDKIVI ITIHQPSSQMFRTLNKLLLLVNGQTAYFGNAQDAVRYFQPLNVPQRQMYNPADYLMELLTADDRFIDQIHLLASNKRQEE AFMTKQNHSHHQQTIISKSNEHSDGFSKQAECDITEVVFHDNLDNNSHGKIWPTTFWTQYYLLTWRNFKQVKGRLFRVPL TLPVLWTALILGMMYFHISKELDTLRDRMGMGVGHVFGALIFDASTAVTSSQTFNICAFLAAGMFTTHFPPWLTWFKYLS FMHYPYAAMVTSILSDVTPIPCNNTAANTFEVCKTSEYLTGKDILTSYGVELPIYCYLATLTIIIFLLKVLLENPSMQYM LVLQLGVVGEPLHAVNVGAATTCYGDPPFF |
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