Gene
| Gene Model ID | pfu_aug2.0_366.1_20674 |
|---|---|
| Locus | scaffold366.1 : 211839 ... 251395 : + |
| To GenomeBrowser | scaffold366.1:211839..251395 |
| Genes list of scaffold | scaffold366.1 |
| Synonym | pfu_aug1.0_643.1_29375 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_366.1_20674.t1 | 1 | 1 | ABC_tran | 243 | 337 | 6.6e-14 | 52.3 | 2.1e-16 | 1.2e-13 | 51.5 |
| pfu_aug2.0_366.1_20674.t1 | 1 | 1 | ABC2_membrane | 548 | 719 | 4.9e-23 | 81.3 | 1.3e-25 | 7.6e-23 | 80.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_366.1_20674.t1 | gi|662192295|ref|XP_008469000.1| | PREDICTED: ABC transporter G family member 14 [Diaphorina citri] | 0.0 |
| pfu_aug2.0_366.1_20674.t1 | gi|241851894|ref|XP_002415806.1| | ABC transporter, putative [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_366.1_20674.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_366.1_20674.t1 atgatagacaataggtttgcgttcttcgagaccattgcgagagcttacctacctccaagnatcttccagcaaattgtcgg aattcccccactccttggcgacattttcctttactcgttcgaagctggattcactcaatctttggtctctgaagggaaaa gatacttaacttctgacttcaacttcacttacagatacatagacgatgtgttgtccatcaataatccaaaattcgcggat taccttagcagtatctatccttcggagcttgaagtcaaagaaagtacagagacaaataattcagcttcctatttggacgt aatgttgtcctacgacactgatagccacatgaacacctcaatctatgacaaatgtgacgacttcaatttcaacattacaa actttccttttctgagtagcaacatcccttcatcgccttcttatggcgtgttcatatctcagttgatacgctatgccaga gcaagtaccaaatatacagaatttattccgagagctaggcgtctttcagaaaagcttctcagtcagggatatgtttgtga ccgactaacatcgtcactgaggaagttctacggtcgatatggggaaatcatcatacactatgatgtcccactctccagaa tggttgatgacatgaagactacagcagcagattcgcgcctggtgtttgacactgtgtctgtcagcatcaagaacaaggac atcctacatagtatcaatggcgtagccaatagcggggagcttcttgctgtcatgggaccgacaggatcagggaagacgac gctcctcaatgccatagcaggacggatccccataacaacaggggaggttactctgaacggaaaacctatgacgaaagcaa ttaggcgtagggttgcttatgtcctgcaagacgatattttcttgtcaaatctcacgctatacgagactctatgggaaccc acatcaggattggattcaagtactgcccacacgttgatgaagcagcttaaaggttatgctacaacctacaataagaccat aatagccaccattcatcaaccatcaagtcaaatataccacatgttctgtaaactactcttattggtcaacggccatacgg cgtactttggtgaggctgacatgaccttgagatattttgaaaacattggtctgacgtgtcagcctaactataaccctgct gactttctacaggtaagacattgttgcactaaggtctaccacgtccatagtgcaacaaacgtgcttataggtgtgaatat ttttatgtccaaaaatgtaccgaaagacgtagtaggatggttgggatatgattctacaggaccaacgtttaatttttttg tagtggaacttctgaagtctgatgatgacgtaatagagaaaatcctagcctcggcaacaaaacacgagaatttccgtgtt gaatcggtaccccacaacacaaaaagttacttagtcaaaacacatcaagtatccatggaaacatctgacgccagtataca cgccctgagatttcaaagaacagattcctctaagtgtattttggacatcagtaccacaaacatcaaagacgccgacattg aagatcagaagacgacgaggaggtggccgaccggattctggacccagtaccgtatgcttacatggaggaactacaggcaa gccaagggaaggatatttgaaccgtatgaggttgcgcagtgcctacttatggctgttatagcaggatgtatgtattttca gatagctgatactctggacacattccgagaccgcattggagcaatattctttagtgtcgtgtactggggattcgtcatgc tgttcttcactatatcaggatttccaggtgagagagttgtcatcaccaaagagcgcagggcaggtgcatatcggctctca tcctactatttagcaaaaatctcaagcgagttgcctctccttattgtgatgccaatcatattctactccatattctattg gatgtcaatgatagggggcgtgtctggttttttcattttcattggaattaatttgatgagttgtttcttgattcagggag ttggacatattataggagctcttattgttaatacaggacatgccttcacagttgtcaacactattatggtcagctcttta gttcttgatattcctatcggtaaatgtgtacagagacttttcccatga |
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Protein
| Protein ID | pfu_aug2.0_366.1_20674.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_366.1_20674.t1 MIDNRFAFFETIARAYLPPXIFQQIVGIPPLLGDIFLYSFEAGFTQSLVSEGKRYLTSDFNFTYRYIDDVLSINNPKFAD YLSSIYPSELEVKESTETNNSASYLDVMLSYDTDSHMNTSIYDKCDDFNFNITNFPFLSSNIPSSPSYGVFISQLIRYAR ASTKYTEFIPRARRLSEKLLSQGYVCDRLTSSLRKFYGRYGEIIIHYDVPLSRMVDDMKTTAADSRLVFDTVSVSIKNKD ILHSINGVANSGELLAVMGPTGSGKTTLLNAIAGRIPITTGEVTLNGKPMTKAIRRRVAYVLQDDIFLSNLTLYETLWEP TSGLDSSTAHTLMKQLKGYATTYNKTIIATIHQPSSQIYHMFCKLLLLVNGHTAYFGEADMTLRYFENIGLTCQPNYNPA DFLQVRHCCTKVYHVHSATNVLIGVNIFMSKNVPKDVVGWLGYDSTGPTFNFFVVELLKSDDDVIEKILASATKHENFRV ESVPHNTKSYLVKTHQVSMETSDASIHALRFQRTDSSKCILDISTTNIKDADIEDQKTTRRWPTGFWTQYRMLTWRNYRQ AKGRIFEPYEVAQCLLMAVIAGCMYFQIADTLDTFRDRIGAIFFSVVYWGFVMLFFTISGFPGERVVITKERRAGAYRLS SYYLAKISSELPLLIVMPIIFYSIFYWMSMIGGVSGFFIFIGINLMSCFLIQGVGHIIGALIVNTGHAFTVVNTIMVSSL VLDIPIGKCVQRLFP |
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