Gene
| Gene Model ID | pfu_aug2.0_366.1_20675 |
|---|---|
| Locus | scaffold366.1 : 274500 ... 286891 : + |
| To GenomeBrowser | scaffold366.1:274500..286891 |
| Genes list of scaffold | scaffold366.1 |
| Synonym | pfu_aug1.0_643.1_29375 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| abc transporter g family member 9 isoform x2 | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_366.1_20675.t1 | 1 | 1 | ABC_tran | 27 | 174 | 6.1e-27 | 94.5 | 3.7e-29 | 1.6e-26 | 93.2 |
| pfu_aug2.0_366.1_20675.t1 | 1 | 1 | AAA_21 | 38 | 202 | 6.3e-10 | 39.4 | 4.3e-11 | 1.9e-08 | 34.6 |
| pfu_aug2.0_366.1_20675.t1 | 2 | 1 | ABC2_membrane | 346 | 551 | 3.5e-31 | 108.0 | 8.0e-34 | 3.5e-31 | 108.0 |
| pfu_aug2.0_366.1_20675.t1 | 1 | 1 | ABC2_membrane_3 | 409 | 592 | 3.3e-08 | 32.9 | 1.3e-10 | 5.8e-08 | 32.1 |
| pfu_aug2.0_366.1_20675.t1 | 2 | 2 | ABC2_membrane | 582 | 605 | 3.5e-31 | 108.0 | 4.2 | 1800.0 | -2.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_366.1_20675.t1 | gi|260812054|ref|XP_002600736.1| | hypothetical protein BRAFLDRAFT_83479 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_366.1_20675.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_366.1_20675.t1 atggcaaacagggctgctgattctcgcctaatatttaaaaatgtccgtgcttcgataaagacaaaggaaattctccacgg cattagtggcatagctactagtgggaaattgcttgccataatgggacctacaggatctgggaaaacaaccttactcaacg tgctggcaagacatatcccaacagtatcaggttcgataactctagatggtgttccactgagaaaagcatcgagacgaaaa gttgcttacgtcatccagaacgacatttttctaacaaaccttacactatacgaaacactgtattttacagctatgcttag gataccggagtacgtatcccatagcgagaagattgcgagaatcgacgagattgttgacgctttaaatataaggggatgca tgaatacagtaattggtaccttcttgaaccgaggactttcaggcggtgaaaagaaaagagcaagcattgcatgtgaactt ctaacagatccagacattatgctgatagacgaaccaacctccggtcttgattctagtactgcctacaaacttatgcagca acttgttacttacgccactaatttcaataaaactattgttacaaccattcatcaaccttccagccaaatttaccatttgt tttgcacacttctcttactggaaaacggacatacagcctattttggcaaagcgtctgacgttgtgacttattttgaagat ctcggatttccatgccagccagactataatccagctgattactgtctggaactgctgacctccaatgacgatgtaattag tatcattagacaatcatctgtgaggcttacgtactttggaagtgagttggatggtaacgatatggacggtgcagcagaga gacggaatacaggacattcttctcataaacctgaatctaatgtttatacaatagaactcgatgatgcacaagattacaat aaagatatgactgtcaaagaaactaccaaagcaggagagcagacagctagggtatggccgaacagtttctcggcgcagta taagatcctaacgtggagaaactacagacaagccaaaggaagaatcattgaccgtaaaactaccatccaggctctaattg ttggccttgttggaggactggtatacttccagattcctgatactctggacacattccgagaccgaatgggactattattt gctactgttttacactggggaatgcaggtggccgtcgtcactatcattggatttccaggagaaagagaagtggtaacaaa agaaagacgtgcaggggcatacagactatctgcctactatctcgcaaaaatctcaagcgagttgcctctcctggcagtga taccaatcttattctattcagcaatgtattggatgtcgatgttaggggacgtgtcacagttctttgttttcctgggaata aacttgatgagctgcttatgtattcagggtgtaggacacgtcatcggagcagttatcgttgacaacaaggacgcactcgt tatttcacacacaagtattgttacattcattatattagctggattctatagtacccatttacccccatcactaaactgga tgaaatacatttctctgatgcattaccccattgctgctatgacaacaataattcttgctgatagagaaatacttccatgc aatgaaacatctctagagacattcaagctttgcgaaaaatcagaattcttaagtaaagaggaacttttggcgacttacgg aatagaagtacccgttcattgttgtctatcaatgcttgccatcttaatcgttctggctaaagttttaggatattttgcct tgaaatggaaacatgtttga |
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Protein
| Protein ID | pfu_aug2.0_366.1_20675.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_366.1_20675.t1 MANRAADSRLIFKNVRASIKTKEILHGISGIATSGKLLAIMGPTGSGKTTLLNVLARHIPTVSGSITLDGVPLRKASRRK VAYVIQNDIFLTNLTLYETLYFTAMLRIPEYVSHSEKIARIDEIVDALNIRGCMNTVIGTFLNRGLSGGEKKRASIACEL LTDPDIMLIDEPTSGLDSSTAYKLMQQLVTYATNFNKTIVTTIHQPSSQIYHLFCTLLLLENGHTAYFGKASDVVTYFED LGFPCQPDYNPADYCLELLTSNDDVISIIRQSSVRLTYFGSELDGNDMDGAAERRNTGHSSHKPESNVYTIELDDAQDYN KDMTVKETTKAGEQTARVWPNSFSAQYKILTWRNYRQAKGRIIDRKTTIQALIVGLVGGLVYFQIPDTLDTFRDRMGLLF ATVLHWGMQVAVVTIIGFPGEREVVTKERRAGAYRLSAYYLAKISSELPLLAVIPILFYSAMYWMSMLGDVSQFFVFLGI NLMSCLCIQGVGHVIGAVIVDNKDALVISHTSIVTFIILAGFYSTHLPPSLNWMKYISLMHYPIAAMTTIILADREILPC NETSLETFKLCEKSEFLSKEELLATYGIEVPVHCCLSMLAILIVLAKVLGYFALKWKHV |
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