Gene
| Gene Model ID | pfu_aug2.0_3665.1_19165 |
|---|---|
| Locus | scaffold3665.1 : 1597 ... 24605 : - |
| To GenomeBrowser | scaffold3665.1:1597..24605 |
| Genes list of scaffold | scaffold3665.1 |
| Synonym | pfu_aug1.0_3723.1_30515 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3665.1_19165.t1 | 2 | 1 | ketoacyl-synt | 10 | 115 | 5.6e-29 | 101.3 | 4.2e-23 | 3.1e-19 | 69.4 |
| pfu_aug2.0_3665.1_19165.t1 | 2 | 2 | ketoacyl-synt | 134 | 182 | 5.6e-29 | 101.3 | 5.7e-11 | 4.3e-07 | 29.6 |
| pfu_aug2.0_3665.1_19165.t1 | 1 | 1 | Ketoacyl-synt_C | 189 | 305 | 2.2e-36 | 124.3 | 4.5e-40 | 3.4e-36 | 123.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3665.1_19165.t1 | gi|723535365|ref|XP_010296122.1| | PREDICTED: fatty acid synthase [Balearica regulorum gibbericeps] | 0.0 |
| pfu_aug2.0_3665.1_19165.t1 | gi|704308033|ref|XP_010165050.1| | PREDICTED: fatty acid synthase isoform X2 [Caprimulgus carolinensis] | 0.0 |
| pfu_aug2.0_3665.1_19165.t1 | gi|704308031|ref|XP_010165049.1| | PREDICTED: fatty acid synthase isoform X1 [Caprimulgus carolinensis] | 0.0 |
| pfu_aug2.0_3665.1_19165.t1 | gi|675604545|ref|XP_008939703.1| | PREDICTED: LOW QUALITY PROTEIN: fatty acid synthase-like [Merops nubicus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3665.1_19165.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3665.1_19165.t1 atgccagaagatagtcattccccactgatagtaggccttgcgggtcgcctgccaaagtcagataatgtggaggacttttg gaataacttgatgaataaacgagacatgatcgggaggacccgctggccggagggattgtttgatatgccgcccagagctg gactcataaataacgtggataaatttgacgcagaatactttggtttcacagaatcagaggctcagagtatgaacccttta ctgagacacatgtttgaggtgtgttatgagtgtgtagtggacagtgggctgcctgtcgagtcgctgcagaataataccac agggatgtacaccgcctgcttcctcccaggacatgatggacttgagatatcacgatgggcaaactcaaaatattgctgca atctgctgttgaatccgtcctatatacagatgatgatgaaacttggtatgttgaaccccacaggacagagtaacgtgttt gatgctgacgcaggaggttatgtcagggcagagggaattgtcgccattcttcttacaagacaagagcgtttgtgcaagag gatatatgcttctgtggtagacataatcacaggctgtgatggattcaaagaagaaggtatcacatttccaagtgccaaat ctcagactgagatgatagagatgttatataaaagagctggagtagatgtgaataaggtggcttatatggaggcccatagt acaggtactaaggcaggagaccctgtggaggtgtcagctatagcagagtcactgtgtaaggagaggagagaacctctatt cgtgggatctgtcaaagctaatatgggacactctgaagctactgctgcccttgccagccttatgaagtgtctcctagcag ccaggcatggagttatcccccctcagattaactataacaccaccaatcctaaactaacagcagtggctgaaggaaaagtt gtcatagtcagtaaacctaccaaattaccagaggatatttatccaatggtagtgcctgtaacagctaggactgacaaaga actggccaatatcagcagctttgtgagacagaacttccagaactcgtcacaactggccctattggctgattctgttctgt cacatgactgtaatagaccaatcagaggcttctttgttactgatccaaaaagaaaaggcgcagatttcttcgttagaacg gctgtacaggtggtacatcctcatcttcatcttcatgttgttcatcctgctcaggggctacaaatcctgctgttctgtag ctgctcatcaatatggaagccctcacagaccaccaggcttgacggagtaaatgtactgcttctaaaagtgtcagttcatt ggctgtcatctctgtatcgtcaatgttcccaatga |
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Protein
| Protein ID | pfu_aug2.0_3665.1_19165.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3665.1_19165.t1 MPEDSHSPLIVGLAGRLPKSDNVEDFWNNLMNKRDMIGRTRWPEGLFDMPPRAGLINNVDKFDAEYFGFTESEAQSMNPL LRHMFEVCYECVVDSGLPVESLQNNTTGMYTACFLPGHDGLEISRWANSKYCCNLLLNPSYIQMMMKLGMLNPTGQSNVF DADAGGYVRAEGIVAILLTRQERLCKRIYASVVDIITGCDGFKEEGITFPSAKSQTEMIEMLYKRAGVDVNKVAYMEAHS TGTKAGDPVEVSAIAESLCKERREPLFVGSVKANMGHSEATAALASLMKCLLAARHGVIPPQINYNTTNPKLTAVAEGKV VIVSKPTKLPEDIYPMVVPVTARTDKELANISSFVRQNFQNSSQLALLADSVLSHDCNRPIRGFFVTDPKRKGADFFVRT AVQVVHPHLHLHVVHPAQGLQILLFCSCSSIWKPSQTTRLDGVNVLLLKVSVHWLSSLYRQCSQ |
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