Gene
| Gene Model ID | pfu_aug2.0_3676.1_22429 |
|---|---|
| Locus | scaffold3676.1 : 48516 ... 56863 : - |
| To GenomeBrowser | scaffold3676.1:48516..56863 |
| Genes list of scaffold | scaffold3676.1 |
| Synonym | pfu_aug1.0_14738.1_03545 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| activating transcription factor 7-interacting protein 1 isoform x2 | GO:0006355 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3676.1_22429.t1 | 2 | 1 | DUF3504 | 94 | 152 | 4.8e-06 | 26.4 | 1.4e-09 | 1.0e-05 | 25.3 |
| pfu_aug2.0_3676.1_22429.t1 | 2 | 2 | DUF3504 | 194 | 207 | 4.8e-06 | 26.4 | 0.53 | 3900.0 | -2.6 |
Transcript
| Transcript ID | pfu_aug2.0_3676.1_22429.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3676.1_22429.t1 acacatagacgatgtgttgtccatcaataatccaaaattcgcggattacctgagcagtatctatccttcagagcttgaag tcaaagaaactacagagacgaataattcagcatactatttggacagaatgttgtcatacgacactgatggtcacatgaac acctcactctatgacaaacgtgacgacttcaatttcagcattacaaactttccttttctaagtagcaacatcccttcatt gactgcttatggcgtgttcatatatcagttgatacgctatgccagagcaaagagtgataggtgtcctatgaggagcttcg ttaaattcatcggacgactaatcccagactgtccattcttgtttcaacaaccgcgagatcaaccaaaagggaatgtttac tacaacaatgttgttcttggccacaacaaattgggcaacatgatgccaaatataagtgaggcagcatcattgtcgatgag atatacaaatcattcattgcgtgctaccacagtgcctattttggatgctgcccaaataccaagtaggcatataatggcag taactggacacaaatcagaaaattctctaaagacatactcaggtcaaacaactgaaaacacaaagaaagctatgtcccac tccttaagtaagagttctggagctatggcgaaagcaccagttacgtcgactataacacgcccagtttcagttcctccagt tacaacaggtcctcttatggagttgaataagtcagtcacagcagagcctcaatccaacctactcaatgatggacttgact cgctttatgcaaatgactgctcctag |
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Protein
| Protein ID | pfu_aug2.0_3676.1_22429.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3676.1_22429.t1 HIDDVLSINNPKFADYLSSIYPSELEVKETTETNNSAYYLDRMLSYDTDGHMNTSLYDKRDDFNFSITNFPFLSSNIPSL TAYGVFIYQLIRYARAKSDRCPMRSFVKFIGRLIPDCPFLFQQPRDQPKGNVYYNNVVLGHNKLGNMMPNISEAASLSMR YTNHSLRATTVPILDAAQIPSRHIMAVTGHKSENSLKTYSGQTTENTKKAMSHSLSKSSGAMAKAPVTSTITRPVSVPPV TTGPLMELNKSVTAEPQSNLLNDGLDSLYANDCS |
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