Gene
| Gene Model ID | pfu_aug2.0_3683.1_12507 |
|---|---|
| Locus | scaffold3683.1 : 16776 ... 33235 : + |
| To GenomeBrowser | scaffold3683.1:16776..33235 |
| Genes list of scaffold | scaffold3683.1 |
| Synonym | pfu_aug1.0_19858.1_25835 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3683.1_12507.t1 | 5 | 1 | SH3_2 | 1000 | 1053 | 5.49309e-43 | 144.2 | 1.3e-09 | 6.6e-06 | 25.5 |
| pfu_aug2.0_3683.1_12507.t1 | 5 | 1 | SH3_1 | 1002 | 1046 | 0.0 | 190.1 | 2.3e-14 | 1.1e-10 | 40.6 |
| pfu_aug2.0_3683.1_12507.t1 | 5 | 1 | SH3_9 | 1003 | 1050 | 0.0 | 199.3 | 7.2e-14 | 3.5e-10 | 39.2 |
| pfu_aug2.0_3683.1_12507.t1 | 5 | 2 | SH3_9 | 1101 | 1149 | 0.0 | 199.3 | 7.3e-14 | 3.6e-10 | 39.2 |
| pfu_aug2.0_3683.1_12507.t1 | 5 | 2 | SH3_1 | 1101 | 1144 | 0.0 | 190.1 | 1.9e-14 | 9.5e-11 | 40.9 |
| pfu_aug2.0_3683.1_12507.t1 | 5 | 2 | SH3_2 | 1102 | 1150 | 5.49309e-43 | 144.2 | 3.5e-12 | 1.7e-08 | 33.7 |
| pfu_aug2.0_3683.1_12507.t1 | 5 | 3 | SH3_9 | 1219 | 1258 | 0.0 | 199.3 | 1.9e-12 | 9.5e-09 | 34.7 |
| pfu_aug2.0_3683.1_12507.t1 | 5 | 3 | SH3_2 | 1219 | 1256 | 5.49309e-43 | 144.2 | 2.1e-08 | 0.0001 | 21.7 |
| pfu_aug2.0_3683.1_12507.t1 | 5 | 3 | SH3_1 | 1220 | 1254 | 0.0 | 190.1 | 6.0e-07 | 0.003 | 16.9 |
| pfu_aug2.0_3683.1_12507.t1 | 5 | 4 | SH3_2 | 1287 | 1338 | 5.49309e-43 | 144.2 | 5.0e-12 | 2.5e-08 | 33.2 |
| pfu_aug2.0_3683.1_12507.t1 | 5 | 4 | SH3_1 | 1288 | 1333 | 0.0 | 190.1 | 2.3e-17 | 1.1e-13 | 50.2 |
| pfu_aug2.0_3683.1_12507.t1 | 5 | 4 | SH3_9 | 1289 | 1337 | 0.0 | 199.3 | 1.1e-14 | 5.3e-11 | 41.9 |
| pfu_aug2.0_3683.1_12507.t1 | 5 | 5 | SH3_1 | 1372 | 1419 | 0.0 | 190.1 | 1.0e-13 | 5.0e-10 | 38.6 |
| pfu_aug2.0_3683.1_12507.t1 | 5 | 5 | SH3_9 | 1373 | 1422 | 0.0 | 199.3 | 3.9e-14 | 1.9e-10 | 40.1 |
| pfu_aug2.0_3683.1_12507.t1 | 5 | 5 | SH3_2 | 1373 | 1422 | 5.49309e-43 | 144.2 | 4.1e-10 | 2.0e-06 | 27.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3683.1_12507.t1 | gi|585686840|ref|XP_006820391.1| | PREDICTED: SH3 domain-containing protein 19-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_3683.1_12507.t1 | gi|632971561|ref|XP_007902231.1| | PREDICTED: SH3 domain-containing protein 19, partial [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_3683.1_12507.t1 | gi|513182314|ref|XP_420444.4| | PREDICTED: SH3 domain-containing protein 19 [Gallus gallus] | 0.0 |
| pfu_aug2.0_3683.1_12507.t1 | gi|697524031|ref|XP_009687528.1| | PREDICTED: SH3 domain-containing protein 19 isoform X3 [Struthio camelus australis] | 0.0 |
| pfu_aug2.0_3683.1_12507.t1 | gi|686609869|ref|XP_009281575.1| | PREDICTED: SH3 domain-containing protein 19 [Aptenodytes forsteri] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3683.1_12507.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3683.1_12507.t1 atgcgcttgtttaatgactgcaaccccaattctcacatgcccattcaccctcacaataccccgactacaaatgggggaaa tggcgagagaagtggtcctccagttccagccagacctgcaccccctgtcccacctggatctgcctctagatcatctacag tggatgtggtacctacaccacaccctaaaccccctccccccacacacaggccatcagtacaaagacccagtaaaacagat gatgatttgcctcctgtagtgacgagaaatcatgctactaagcccagtaggccagtatcagtatcagcagctaaaacatc agataatgttaggagacgaccagaaattactattgtagctgctagaccaatgagtgaggttggcttcagaggggaacagg cagcttcaggagcaaaaccaggaatggctgtggaaagtaaaactagtgatataacaggggaggacaggaaagatgaaaca aagaataatccattaccaaaggtacctccaaggaaggatactcaaccccagagatcgcaatcaatgaaacaacctcctgg acgccctccacatatacccccagtacacccctcatctgtctcaaatacgaacatgccatcatctagtgtagtgcagaatg actcactccttctagacttggatatccctgacaagactgcttcagatatccttgttccactaaatttatcagttaattca tctgtccatcctgacgaaaaggaccaatcagaggatgttgatgttaaaccacgccctaaacctgctgaaaggcccaaggc tccaccccagaggcctgcaagttcagtagttggctctggaaagccacgttctaatccaccaatcagaggtcctcctccaa aagccccaccccctaaagtgtcccctagaaatgatgtgaaggaaacaaataaaggaacagaaggaggggactcatcctca caaacagtgcagcaggacatagatattcataccacacagcaaacagaaagcaaggagacagaagtgaaaaagcctccacc tagcaagccaataaagcctcccgtttcaaaaccagctcctgccagaagagctccacctagacctcaaccagttgatatac ctactccatcagagcctttgtcaacatctgccactgagccatcttcacaaacgagtgctcatggagagcaaaatcaggat tcaaaaagtcaagagcaagagacatcaccaaaaacgcctccactgccagcaagacactacaatgatgatgtcaaacatga tgtatctgacgctacaccaagtggaattggttctgaaacatctgatgttcaaaatatgtctgctccaaaacctgtaataa aaactaaaccctccattgtggggagaccaaagtctttcagtttaagagaaacagcctcaaaatttgaagcttcattggaa cagaatgtgaaatcagcagaaaataagcattctgtgcttccatctcctgcaccaaaacccaaacccaaacctactgtatt agcaaaaccacgttcttcctccatgccaattgagaaatccagccctgataccagtattgataatagtgataattcacacc atccaatagatttcaaaacggacaataaggaaacgttaaccaaatcagatgataaggaaatcggaacttccgaagtggaa aaaaagaagccagagagaccaacgataataagaccacctgcaaagcctaaaagaactataacagatgattcaatagagaa gcctatggtaacaagtgatgattcacagatacctgatgtcaaacattccccatctccagtattgtcaaaaagacctgtta gtgttatgttaccacccggtcatactggtgtatttgacgggaaactttcaaagtctgaaaatgaggaagaaaataatgaa agtgaaaattctacaaagcctgaaagacctttaaggcagccagtttctactggtccccccaaacctccacataaaccccc tctaccctctactagtccagcttgtcatatagcggaagaaaataaaaatggcaatgaaaattccaaaaagcctgaaagac cagcaaatcagccagtttctactggtccctcaaaacctccacataaacccctgctaccctccactagtccagctggtcat acatcaacaataccatcagaactttcctcagatggtgacacatgtgaaaatgtcacaactgaagatacccagtctgctct atcaagtaacaaaccaaagattccattaagtccatcaaataagccatcagagtctgtctcagagaaaatagatcaagatg gcacgcagccagtgacaccatcaaagccaccgccaaaaccacctttaccatccgctaagtctctggatgaaatttctcct gctagtgtggaggaaattactgagtcttcagaagatagtcctgtgcaatcctcaagtgccttgaaacctgtgccacaaaa accacaggtaccgccagctagtccagccgtccattcttctaatactaatgtagaagcaaggtccaatgaggaggatttga ctcagtctgttgtgccatcaaaacccccacctcctgtgaaatccccggtttctgtgccaactaaacccccaccacctact gtgaagtctccagcttctgatactaatcctgccagtgctgaaaatctgattgagaagaaagcagacaacactgtggaaac tgctgaaaaagatatttctgagaatccagatgctgtgaggagaccccctcctccagagttccaagggaccaatagtagtg taccatcaaccacacaatctcaagaggaggaacataaaatggaccaatcaaaacctgcaatggtgaaggaggttataaag aagggagaaaagccaccacctgcccgtcctgctgttccacaaagagaatctccccctgagctgccctcccggcccggacc aggacaccccctgtatcattatatgctgagtaccccacatggtatagctctacatgactttgatgcttcacatcaggatg agctgtctctcaaagttaatgaagttgtggtattattgaaaagggtagacgactcatggttgatgggccagatagggaat cggcaaggaatatttccgcaggattttcttgccatacagattcctctaccaggagagcttcctccatctgagatggttat gaatacagcagatgttactcgagatgtttggggagaagttagctatcaggaagaaattcaagaaaaaattgacaccatag gaaaaggaccaagatgctgtgctaggttcgactttgagggagggggtgccggtgatttacaatttgaagaaggggactat atcaaaatactagaaagagttgattccgagtggttgaggggagaactgcatggaacagttggcatctttccaatttcatt tgtggagataattgaggatctcccattggacaattcagatttaggtcaaggacaagctggggtctcaggtcaaggtcaag taggggtttcaactaataatagtttaacaacaagttctagcaatgagaatgtgacagttcaggaacaaggacatctacaa caagattttcaacaggcagaattttcagctatggttctacataatcgcagagggggaccaggagaattatcacttcagtt tggagattatgtgaagctcatacatgaaatatcagatgattggttgtatggcgagattcgaggtcagaagggaaagttcc cagtcagtattatagatgctgttcctccaggcttaccacaggatggggggtcccaacctcactctagtcctaagggtacc atgcaagggaccacactctgtgtggcaatgtatgacttccagagtattgatccaggggatttgaactttgtgacaggaga caagattgaaattattgaaaaactaggtgatgaatggctgaaaggaaaactgaatggaaaggaaggaattttcccgagta actttgtgcaaatagaagaagtggagaatctaccaagaaatgagacccctgatcccaagcctgtatttactatagactca ccacagacctctgatgacatagcgaccactggtacagcattgtatgatttttatggacagaatgactctgaactatcatt tcaggcaggagacattataatactgggtgattacgtgcccggggctgaagaatggagagtaggagagcttaatggacacc aggggatgtttcctgccagctttgtcaactga |
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Protein
| Protein ID | pfu_aug2.0_3683.1_12507.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3683.1_12507.t1 MRLFNDCNPNSHMPIHPHNTPTTNGGNGERSGPPVPARPAPPVPPGSASRSSTVDVVPTPHPKPPPPTHRPSVQRPSKTD DDLPPVVTRNHATKPSRPVSVSAAKTSDNVRRRPEITIVAARPMSEVGFRGEQAASGAKPGMAVESKTSDITGEDRKDET KNNPLPKVPPRKDTQPQRSQSMKQPPGRPPHIPPVHPSSVSNTNMPSSSVVQNDSLLLDLDIPDKTASDILVPLNLSVNS SVHPDEKDQSEDVDVKPRPKPAERPKAPPQRPASSVVGSGKPRSNPPIRGPPPKAPPPKVSPRNDVKETNKGTEGGDSSS QTVQQDIDIHTTQQTESKETEVKKPPPSKPIKPPVSKPAPARRAPPRPQPVDIPTPSEPLSTSATEPSSQTSAHGEQNQD SKSQEQETSPKTPPLPARHYNDDVKHDVSDATPSGIGSETSDVQNMSAPKPVIKTKPSIVGRPKSFSLRETASKFEASLE QNVKSAENKHSVLPSPAPKPKPKPTVLAKPRSSSMPIEKSSPDTSIDNSDNSHHPIDFKTDNKETLTKSDDKEIGTSEVE KKKPERPTIIRPPAKPKRTITDDSIEKPMVTSDDSQIPDVKHSPSPVLSKRPVSVMLPPGHTGVFDGKLSKSENEEENNE SENSTKPERPLRQPVSTGPPKPPHKPPLPSTSPACHIAEENKNGNENSKKPERPANQPVSTGPSKPPHKPLLPSTSPAGH TSTIPSELSSDGDTCENVTTEDTQSALSSNKPKIPLSPSNKPSESVSEKIDQDGTQPVTPSKPPPKPPLPSAKSLDEISP ASVEEITESSEDSPVQSSSALKPVPQKPQVPPASPAVHSSNTNVEARSNEEDLTQSVVPSKPPPPVKSPVSVPTKPPPPT VKSPASDTNPASAENLIEKKADNTVETAEKDISENPDAVRRPPPPEFQGTNSSVPSTTQSQEEEHKMDQSKPAMVKEVIK KGEKPPPARPAVPQRESPPELPSRPGPGHPLYHYMLSTPHGIALHDFDASHQDELSLKVNEVVVLLKRVDDSWLMGQIGN RQGIFPQDFLAIQIPLPGELPPSEMVMNTADVTRDVWGEVSYQEEIQEKIDTIGKGPRCCARFDFEGGGAGDLQFEEGDY IKILERVDSEWLRGELHGTVGIFPISFVEIIEDLPLDNSDLGQGQAGVSGQGQVGVSTNNSLTTSSSNENVTVQEQGHLQ QDFQQAEFSAMVLHNRRGGPGELSLQFGDYVKLIHEISDDWLYGEIRGQKGKFPVSIIDAVPPGLPQDGGSQPHSSPKGT MQGTTLCVAMYDFQSIDPGDLNFVTGDKIEIIEKLGDEWLKGKLNGKEGIFPSNFVQIEEVENLPRNETPDPKPVFTIDS PQTSDDIATTGTALYDFYGQNDSELSFQAGDIIILGDYVPGAEEWRVGELNGHQGMFPASFVN |
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