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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_3684.1_15839
Locus scaffold3684.1 : 43863 ... 56665 : -
To GenomeBrowser scaffold3684.1:43863..56665
Genes list of scaffold scaffold3684.1
Synonym pfu_aug1.0_16080.1_54269

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_3684.1_15839.t1 gi|195999036|ref|XP_002109386.1| predicted protein [Trichoplax adhaerens] 4.0e-22
pfu_aug2.0_3684.1_15839.t1 gi|260837272|ref|XP_002613629.1| hypothetical protein BRAFLDRAFT_93670 [Branchiostoma floridae] 4.0e-17

Transcript
Transcript IDpfu_aug2.0_3684.1_15839.t1
Definition-
>pfu_aug2.0_3684.1_15839.t1
cagagaaaagacataaaccaaatgtgaacaaacgacatcttacggatgaaaattacattatttggagagatgattatgat
tgcatcatactaaaatggaaaacaaatgaaaagaaataccaaaacaacctgacattatgtggagtcattgtgagtataga
aataaatgtatttggagaaattcgattcagtttgacaagtggtgtggacagatttcctcagtttgtgtatcatagattgg
attacgtggaaaacttcactctagatgatgtcagtgtatgtatcaaggaccatatgatgatcatgccaaataatgccact
atcaagttttctccctcctccttctctcgaccagagcagaacatgatgtttgagcataacagcagttatagcagtctttt
ctaccagccgtataatacgtctaaagatttctctactcaaacaggcgtgatgagccctgcagctaaagatgtccaactaa
cacacaagttagatgatttctggatgcttgagggagatataatatggagatacctaggcacagaaaatggcttgttccgt
gtatatccaggtacacttgtaccagacaccctgtacgatccccgagaagacacctggtatgttacagcaatcaacgaccc
tgatatctacatgttctcagaaatggacatctcaaacgacaacaatacaatcgtgaccatttcaaagtcattccatctct
ccaaacacagtatacatggtgtcattgcggcagacatttcctaccatcactttctggctttcctgtacaatgaactacag
aaaataatccaaaagaaaacagattgttatgtactagacaagtctgggatgatcctagccaggtttgagaatggtactac
tgtaaagtcctctacacgtggcacacatatctcccacgctctacctgttgtggcagcttggcttgtcaacaaaggataca
tgaatgttagaaatcattgttga

Protein
Protein IDpfu_aug2.0_3684.1_15839.t1
Definition-
>pfu_aug2.0_3684.1_15839.t1
EKRHKPNVNKRHLTDENYIIWRDDYDCIILKWKTNEKKYQNNLTLCGVIVSIEINVFGEIRFSLTSGVDRFPQFVYHRLD
YVENFTLDDVSVCIKDHMMIMPNNATIKFSPSSFSRPEQNMMFEHNSSYSSLFYQPYNTSKDFSTQTGVMSPAAKDVQLT
HKLDDFWMLEGDIIWRYLGTENGLFRVYPGTLVPDTLYDPREDTWYVTAINDPDIYMFSEMDISNDNNTIVTISKSFHLS
KHSIHGVIAADISYHHFLAFLYNELQKIIQKKTDCYVLDKSGMILARFENGTTVKSSTRGTHISHALPVVAAWLVNKGYM
NVRNHC

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