Gene
| Gene Model ID | pfu_aug2.0_3690.1_02472 |
|---|---|
| Locus | scaffold3690.1 : 52734 ... 56403 : - |
| To GenomeBrowser | scaffold3690.1:52734..56403 |
| Genes list of scaffold | scaffold3690.1 |
| Synonym | pfu_aug1.0_14616.1_54084 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 3-ketodihydrosphingosine reductase-like | GO:0016491 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3690.1_02472.t1 | 1 | 1 | adh_short | 5 | 97 | 7.1e-18 | 65.0 | 3.0e-21 | 1.1e-17 | 64.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3690.1_02472.t1 | gi|676446302|ref|XP_009051035.1| | hypothetical protein LOTGIDRAFT_213963 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_3690.1_02472.t1 | gi|392529006|gb|AFM78304.1| | 0.0 | |
| pfu_aug2.0_3690.1_02472.t1 | gi|410928514|ref|XP_003977645.1| | 0.0 | |
| pfu_aug2.0_3690.1_02472.t1 | gi|734602670|ref|XP_010728300.1| | PREDICTED: 3-ketodihydrosphingosine reductase [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_3690.1_02472.t1 | gi|58801522|ref|NP_957433.1| | 3-ketodihydrosphingosine reductase [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3690.1_02472.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3690.1_02472.t1 gcagagtccatactgggccccatacaaatgctgatcaactgcgcaggaagtgctatcagtaaaacatttgaggacacttc cgcagaggattttaagagaatgatagagctgaactacttaggcagtgtatacaccgcaaaagctattataccttccatga aggcccagaaccagggtcgtgtggtgttcgtgtcctctcaggcagggcaggttggactatttggattcacggcttactgc ccttctaaatttgccctcaagggcctggcagaaagcttacagatggaggtaaaaccgtacaacatacacataacattggc ccatcctgcagacacagatactcctggatttgctgaggaaaatacaactaagccaaaggaaacaatgatgataagtgaga cagctggactctacacaccagagaatgtagccaacacaattctaaaccatagtgtggctggaaaattctgcagttaccat gggattgatggtttcctattggctagtgttaccagtggtatgagtcctgttacatcactactcgatgccttatctcagat atttacagcaagtatctttcgtgctatatgccttttttatgtcgcctattttgacagcatcgtccgaaaatgtaaaaaag aaagagaacaaactttaaaaaaagaaaaatga |
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Protein
| Protein ID | pfu_aug2.0_3690.1_02472.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3690.1_02472.t1 AESILGPIQMLINCAGSAISKTFEDTSAEDFKRMIELNYLGSVYTAKAIIPSMKAQNQGRVVFVSSQAGQVGLFGFTAYC PSKFALKGLAESLQMEVKPYNIHITLAHPADTDTPGFAEENTTKPKETMMISETAGLYTPENVANTILNHSVAGKFCSYH GIDGFLLASVTSGMSPVTSLLDALSQIFTASIFRAICLFYVAYFDSIVRKCKKEREQTLKKEK |
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