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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_3699.1_32527
Locus scaffold3699.1 : 17030 ... 19055 : -
To GenomeBrowser scaffold3699.1:17030..19055
Genes list of scaffold scaffold3699.1
Synonym pfu_aug1.0_3905.1_59371

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_3699.1_32527.t1 1 1 Retrotrans_gag 30 108 8.3e-06 25.7 1.6e-09 1.2e-05 25.2

Transcript
Transcript IDpfu_aug2.0_3699.1_32527.t1
Definition-
>pfu_aug2.0_3699.1_32527.t1
atgggaaagaaagaaaaaagagcaaaaagaggtaagaacaaaagtatagaaacagaaacagcgacacttagtctgtcgga
aggatgtgtacccaggtccacagagtcctttaccccactcctaaaagagttagacagtggattcattgtcgtagagacta
aaaggtcgtttgctgcgaagttcaataatagaaatcagaaatctggggagtcaattgaacaatatgcagctgaacttaaa
aagttgtactcgaaggcgtatccaggaagggatacgaccacgagaaatgaggatctagtaagaaggttcttagatggact
tttagacgacgacgcacagtttcaagtagaatttggcaaatgtcctagtacaattgatgaagccgtcagtgaagtagtaa
acttcatggagacgagaaaagggcgcagagaaaagaaagtacttttctctgtatatttacaagagtag

Protein
Protein IDpfu_aug2.0_3699.1_32527.t1
Definition-
>pfu_aug2.0_3699.1_32527.t1
MGKKEKRAKRGKNKSIETETATLSLSEGCVPRSTESFTPLLKELDSGFIVVETKRSFAAKFNNRNQKSGESIEQYAAELK
KLYSKAYPGRDTTTRNEDLVRRFLDGLLDDDAQFQVEFGKCPSTIDEAVSEVVNFMETRKGRREKKVLFSVYLQE

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