Gene
| Gene Model ID | pfu_aug2.0_37.1_23288 |
|---|---|
| Locus | scaffold37.1 : 7846 ... 24705 : - |
| To GenomeBrowser | scaffold37.1:7846..24705 |
| Genes list of scaffold | scaffold37.1 |
| Synonym | pfu_aug1.0_359.1_43625 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_37.1_23288.t1 | 2 | 1 | TFR_dimer | 50 | 82 | 2.5e-21 | 75.5 | 0.075 | 370.0 | 0.6 |
| pfu_aug2.0_37.1_23288.t1 | 2 | 2 | TFR_dimer | 541 | 654 | 2.5e-21 | 75.5 | 6.0e-24 | 3.0e-20 | 72.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_37.1_23288.t1 | gi|390332917|ref|XP_784853.3| | 0.0 | |
| pfu_aug2.0_37.1_23288.t1 | gi|390332915|ref|XP_003723594.1| | PREDICTED: N-acetylated-alpha-linked acidic dipeptidase 2 isoform X1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_37.1_23288.t1 | gi|260791702|ref|XP_002590867.1| | hypothetical protein BRAFLDRAFT_285244 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_37.1_23288.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23288.t1 atgcgtcacgactcatattcacagtcaacggaagaaatgttcccaaaatatcaaaagagccgtacaagatatatgttata tgctttggtgatttttgttatagcatttgtaataggcattttgattggacgatacgcaacatgtccacaacaggaagaaa agcagacgtcacttcctgctatgaatgatgcaatcattaaagaggcagattccgaaattggagacgatattataaatcaa attagcagtgaaaatatcagattatatttgcgtgacctatcagaacttccccacttggctggtacaccggcagactacac acaagcaaaggaactggtagatttttggtctggtgtgggtctagatgagacatttcttactccatatgatgtgctgctat cctacccaaacaatgacgatgaatcccagatgaacagactgtttgtatatgatgacaatggtcaaacagtatggcagtca gatttaagggaacctatccttcatcctagtgagaacaagtctgacgtagtaccccctttcaatgcgtactctgcacccgg agacatcagatcagttgcacaggcagaacgttatggagcccggggtataataatctattccgatcctgctgattatgatg atagtgacacgtcacatgtttaccctgatgattggtggcttccagatagcggtgttcaaagaggcactgtatttcttggc aaaggagatcctcttactcctggataccctgcgattgagactgccttcagacttaatcagagtgatccatcaatagaaac acctaatattcctgtccatcctatcggttatggtatagcatggaatttatttgggtacatgacaggagatgaagtaccca gtgaatggcgaggaggtttaaaccgtacttacaggttcggaggaaacttatcagtatctggacaaagcggatacgttata cttggtaaccatagagacgcttgggttttcggtgcaatagatccgtccagtggtacagcagtaatgaaagaaatctcacg agtgatgggaaatatgcaatatatcaaaaatctggcggctcgttccgttgggtatcttaatgtcgatatttctgttcaag gtaacttttctctccgagcacttgccacgccattattgtatgaagcaatatattctgctaccagaagggtaccaaatcct gatccactcgaatccagtaatgtcaaaacagtgtacgataaatggctgagcagttttcccaatgcagactcatctaaacc gagaataagttcgatgggatcagggagtgattacgcctcatttattcagcaagtaggactgccttgtttggatgtcagat atacctatgatagtaataaatataaggtgtcttcatatccgttataccattcgaagtatgaaactttttacgcagtagac aacatcatcgatcgaggatttaggtttcatactgctgtcggacaaacatgggcagagatagcacggaaccttgctgattc cctcatcataccattcaatgttatggactatgctattgctcttgaatcactagtggaccagttgtttgctgattatgggc ctaaaatggaaagcaatggtatcagatttgaatctcttcggaatgcatctaaagattttactgctgctatgaacaacttt gctgcttcgatttctagcgtcgataagaaaaacccatatgccataagggaaattaacgacaaattgatgaatttagagag agcttttattgatccttcaggtttaccaggacgaccacttgccagcagtgtaaacacatacgctgggagtagttttcctg gtttggtagatggcatgtttgaaatagacgaagctcctgataaagtgcaaagatgggagaaagtaaaagaacattattct gtcatactcttcacaatacaatcagcatcgtctacggttaaagatagtacacggtttatgtag |
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Protein
| Protein ID | pfu_aug2.0_37.1_23288.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23288.t1 MRHDSYSQSTEEMFPKYQKSRTRYMLYALVIFVIAFVIGILIGRYATCPQQEEKQTSLPAMNDAIIKEADSEIGDDIINQ ISSENIRLYLRDLSELPHLAGTPADYTQAKELVDFWSGVGLDETFLTPYDVLLSYPNNDDESQMNRLFVYDDNGQTVWQS DLREPILHPSENKSDVVPPFNAYSAPGDIRSVAQAERYGARGIIIYSDPADYDDSDTSHVYPDDWWLPDSGVQRGTVFLG KGDPLTPGYPAIETAFRLNQSDPSIETPNIPVHPIGYGIAWNLFGYMTGDEVPSEWRGGLNRTYRFGGNLSVSGQSGYVI LGNHRDAWVFGAIDPSSGTAVMKEISRVMGNMQYIKNLAARSVGYLNVDISVQGNFSLRALATPLLYEAIYSATRRVPNP DPLESSNVKTVYDKWLSSFPNADSSKPRISSMGSGSDYASFIQQVGLPCLDVRYTYDSNKYKVSSYPLYHSKYETFYAVD NIIDRGFRFHTAVGQTWAEIARNLADSLIIPFNVMDYAIALESLVDQLFADYGPKMESNGIRFESLRNASKDFTAAMNNF AASISSVDKKNPYAIREINDKLMNLERAFIDPSGLPGRPLASSVNTYAGSSFPGLVDGMFEIDEAPDKVQRWEKVKEHYS VILFTIQSASSTVKDSTRFM |
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