Gene
| Gene Model ID | pfu_aug2.0_37.1_23292 |
|---|---|
| Locus | scaffold37.1 : 71896 ... 74456 : + |
| To GenomeBrowser | scaffold37.1:71896..74456 |
| Genes list of scaffold | scaffold37.1 |
| Synonym | pfu_aug1.0_359.1_43620 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_37.1_23292.t1 | 1 | 1 | BTB | 26 | 130 | 5.0e-25 | 87.6 | 2.2e-28 | 1.1e-24 | 86.5 |
| pfu_aug2.0_37.1_23292.t1 | 2 | 1 | BACK | 104 | 121 | 3.1e-08 | 33.3 | 0.43 | 2100.0 | -1.5 |
| pfu_aug2.0_37.1_23292.t1 | 2 | 2 | BACK | 142 | 236 | 3.1e-08 | 33.3 | 2.3e-11 | 1.1e-07 | 31.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_37.1_23292.t1 | gi|524873349|ref|XP_005093422.1| | PREDICTED: uncharacterized protein LOC101862928 [Aplysia californica] | 0.0 |
| pfu_aug2.0_37.1_23292.t1 | gi|676478982|ref|XP_009061601.1| | hypothetical protein LOTGIDRAFT_127223, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_37.1_23292.t1 | gi|701429827|ref|XP_010003558.1| | PREDICTED: kelch-like protein 17 [Chaetura pelagica] | 2.0e-26 |
| pfu_aug2.0_37.1_23292.t1 | gi|148237265|ref|NP_001085193.1| | kelch-like protein 30 [Xenopus laevis] | 2.0e-25 |
| pfu_aug2.0_37.1_23292.t1 | gi|156717430|ref|NP_001096255.1| | kelch-like protein 30 [Xenopus (Silurana) tropicalis] | 4.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_37.1_23292.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23292.t1 atgtcacactatatgcgggctgataggaagcaatttgtaaagagtcctcaggactttataatcaggcccctactaagaca aagggagacgggcactctatgtgatatcatattacgcgtgaatggtcgtacgttcactgcccacaaagccatattggcac tatggagcccgtactttcactctatgttcacatgcgaaatgagggagaaagtatcatcagaaatcgatttatcggagtca ttgatgctggacgatccagagaaatttggcaccgtacttgactatctgtacactggcaccattaccgtcacagtgtctaa tgtggaggatgtactacggatctccgacttccttcttttagacgaggtcaaggattactgtaaacaattctatttggatt taggaaacttagatctttctaattgtttacgaattaggttcctggcagagaatcacaaccttccggaagttgccgaacct tgtcaaaatatcatcgaatctcgttttcacgattacctcatatttcatgacgaaattttggatctgcagccggaattttt cttcctccttttagaatctccgggaacgctacatagcacggtatataacgatctcaagaaactggtacagagatgggtag agcacgataaaactcacagagaacggtatctagatgacctgtacatcaacatcaaattgtacttgtacgaaagctgtgaa gtaacaagcgctctttctacacatgaccggaaaccaaaattatctaagagaatgcagtcctcgctctccgagaaacaaag aggagcttgcatgtctcacaatttttgtcatagatatgaaaacgttctccatcgttctatgactttgaatgatagcatct gtccaatattgtatgcagtcgttagcaatcaaggaatgaaatttatgaaaatgttagtattcagtgtacttgaccaaaaa tggttccactttcctttcaatggagaaaaactatgtcacatgattccttcccgccaatcaatatctgctctcgttgctca tggaaactgcttatacatgtacctctgctcgagcttcccgtatcccacggacatgttgaaaatctatattcttgccctgg acatgttaaagggacaacctatattgtactcgttcaaaactggggattactacaatccgtgctacaggaccaccctgacc aatcatagggccgctgtcaagaacgaccgtctgatatttctatggttccgtcacagaacaggtccgtctgaagaattctg catcaagaagtctgtcggatttgcaattttcgataccaaatcgcagttattcaactcgtgggaaatttcacctccagaga tttcgtatgatgagttttcccgcccttacagcctctgtgtgcgggacgaaaccgtcctgatctaccaccccggaagacct gcgttggtgctggacgaggtcagatgtaaatggattttgtcgctgcggaagttacccacgcacggtccattgactgattc gcaaacggacatttatggctaccgtattcaagctaccacagaaaacagcatctttatactgaataatgatgctccattta caactagcatgatagaaatatccgaatcttacccatcagcgatcattcacaagcccccgccgatagacaacatttcattg gttgcagctggtcacctgacaagaactgatgtccagggattggaaccgtttgatcgctatgacgattcgtacacaaatgc tttgcaggtcacaatgcgtctttctgaccaagagaccgaggacagtggcacgacgccttctgaccacgactcggacaatg cttacgaatatgatgaggacatttatgattacgattacgacttggagggagatttcggtttttga |
|
Protein
| Protein ID | pfu_aug2.0_37.1_23292.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23292.t1 MSHYMRADRKQFVKSPQDFIIRPLLRQRETGTLCDIILRVNGRTFTAHKAILALWSPYFHSMFTCEMREKVSSEIDLSES LMLDDPEKFGTVLDYLYTGTITVTVSNVEDVLRISDFLLLDEVKDYCKQFYLDLGNLDLSNCLRIRFLAENHNLPEVAEP CQNIIESRFHDYLIFHDEILDLQPEFFFLLLESPGTLHSTVYNDLKKLVQRWVEHDKTHRERYLDDLYINIKLYLYESCE VTSALSTHDRKPKLSKRMQSSLSEKQRGACMSHNFCHRYENVLHRSMTLNDSICPILYAVVSNQGMKFMKMLVFSVLDQK WFHFPFNGEKLCHMIPSRQSISALVAHGNCLYMYLCSSFPYPTDMLKIYILALDMLKGQPILYSFKTGDYYNPCYRTTLT NHRAAVKNDRLIFLWFRHRTGPSEEFCIKKSVGFAIFDTKSQLFNSWEISPPEISYDEFSRPYSLCVRDETVLIYHPGRP ALVLDEVRCKWILSLRKLPTHGPLTDSQTDIYGYRIQATTENSIFILNNDAPFTTSMIEISESYPSAIIHKPPPIDNISL VAAGHLTRTDVQGLEPFDRYDDSYTNALQVTMRLSDQETEDSGTTPSDHDSDNAYEYDEDIYDYDYDLEGDFGF |
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