Gene
Gene Model ID | pfu_aug2.0_37.1_23293 |
---|---|
Locus | scaffold37.1 : 110536 ... 129653 : + |
To GenomeBrowser | scaffold37.1:110536..129653 |
Genes list of scaffold | scaffold37.1 |
Synonym | NA |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
globin x | GO:0006810 GO:0046872 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_37.1_23293.t1 | 2 | 1 | Globin | 23 | 128 | 1.3e-13 | 51.2 | 2.6e-17 | 3.9e-13 | 49.7 |
pfu_aug2.0_37.1_23293.t1 | 2 | 2 | Globin | 136 | 154 | 1.3e-13 | 51.2 | 0.11 | 1700.0 | -0.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_37.1_23293.t1 | gi|56368396|emb|CAG25723.1| | globin X [Danio rerio] | 3.0e-18 |
Transcript
Transcript ID | pfu_aug2.0_37.1_23293.t1 |
---|---|
Definition | - |
>pfu_aug2.0_37.1_23293.t1 atgtctaattttgtaattcgtgatctacccggaaagcaattggatacatatgtgacatcagaggaagtccgattggtgaa gcaaagttggagcattgtgaaacaagacatggaaagtgtcggcgttctcatgttccaaaaattatttgaaatgcaggaac aattaaagaaattgttcacttcccttatgatacccaacgggcaatcctacctcattgatgaagagaaacttcggcagcat gcagtgatagtgatggaaggtcttggtgcggctgtggaaagccttgaagattccatatatttaacaaatttactgatcgc aatgggcgagaggcattacaattacaaagtcagaccggatatgcttgggtacctatggcccgctgttagagacacactga aagagaaacttggcgaagattgttcggaggacgtcgaacgagcttggagtcatgtgtttgaatatgttgccaataaattc caggaaggcattcgtcgtggcaagcagaatcataataaagccgatggggaggacaaagatgacacaacgtcataa |
Protein
Protein ID | pfu_aug2.0_37.1_23293.t1 |
---|---|
Definition | - |
>pfu_aug2.0_37.1_23293.t1 MSNFVIRDLPGKQLDTYVTSEEVRLVKQSWSIVKQDMESVGVLMFQKLFEMQEQLKKLFTSLMIPNGQSYLIDEEKLRQH AVIVMEGLGAAVESLEDSIYLTNLLIAMGERHYNYKVRPDMLGYLWPAVRDTLKEKLGEDCSEDVERAWSHVFEYVANKF QEGIRRGKQNHNKADGEDKDDTTS |