Gene
| Gene Model ID | pfu_aug2.0_37.1_23297 |
|---|---|
| Locus | scaffold37.1 : 239986 ... 257328 : + |
| To GenomeBrowser | scaffold37.1:239986..257328 |
| Genes list of scaffold | scaffold37.1 |
| Synonym | pfu_aug1.0_58235.1_63522 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_37.1_23297.t1 | 1 | 1 | F-box-like | 81 | 125 | 1.4e-10 | 40.7 | 4.8e-14 | 2.4e-10 | 39.9 |
| pfu_aug2.0_37.1_23297.t1 | 1 | 1 | F-box | 82 | 124 | 6.4e-09 | 35.2 | 3.0e-12 | 1.5e-08 | 34.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_37.1_23297.t1 | gi|524901434|ref|XP_005107124.1| | PREDICTED: F-box only protein 16-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_37.1_23297.t1 | gi|698424761|ref|XP_009696139.1| | PREDICTED: F-box only protein 16 [Cariama cristata] | 0.0 |
| pfu_aug2.0_37.1_23297.t1 | gi|543739456|ref|XP_005510630.1| | PREDICTED: F-box only protein 16 [Columba livia] | 0.0 |
| pfu_aug2.0_37.1_23297.t1 | gi|697042762|ref|XP_009584087.1| | PREDICTED: F-box only protein 16 [Fulmarus glacialis] | 0.0 |
| pfu_aug2.0_37.1_23297.t1 | gi|701420536|ref|XP_010000486.1| | PREDICTED: F-box only protein 16 [Chaetura pelagica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_37.1_23297.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23297.t1 atgtcaatgattgcgaagaatcgtttgaaaagttcatggactccgctcagtaacgaagaaacgaataataagatttttga ggaacgatttcatctgcttggaaaatggtatgacaaatggacagacgaacagagacgtagagttttagaagatttactga acagatcaaaggtcaaacagttgaagtttgcccaggaggtgacgaatgagaaggttccgttgatcagagaggatttcaca cgggagttacctaaggctatatctatacacatcctgtcattccttgatcctcgcagtctttgtagatgtgcaagggtatg ttggtattggaaaactctgtcagaacttgaccagttatggatgccaaaatgtttacgctacggctggttcttaccgttta cccctagtccttacgaagtaggagtgtggaaacgcaactatatagaaaatatcaaatatattcaggtgttaagacccagg gacactgccctcacgttagaaagacttagattagacgcagatgagaagagagcaaagtcaagatcggataaagacaaaaa gaaaggagtagcaccatggagaggttctgaccctaaccccaaagatacgtggcgatacaatgtactggaaaatgatgatg tggtagaccaggtcaacaaaataaggaagaagaagagctatggtgctgacgttgatgagatatctcggaacgctcgatct cgtgtgaaatccggacaaaatatactcaaccatacaaggagatctcagacctatattccaccacttaatttaatgccaga ggccctattgtctgattcagcagcctcaatgtataacagaccggcatgggccacacagacggcaccctacgtatccttcg atgctacagtgatggacaagaataatcgtaacaaatctcgtcctagatccacctcaccacctaagccaggatccaggcct atgactgccaggtcggagcgggatccacccactacacagctttttcctgagaagccatggactgttccggacagtcaaga ttccgacgaggaacagtga |
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Protein
| Protein ID | pfu_aug2.0_37.1_23297.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23297.t1 MSMIAKNRLKSSWTPLSNEETNNKIFEERFHLLGKWYDKWTDEQRRRVLEDLLNRSKVKQLKFAQEVTNEKVPLIREDFT RELPKAISIHILSFLDPRSLCRCARVCWYWKTLSELDQLWMPKCLRYGWFLPFTPSPYEVGVWKRNYIENIKYIQVLRPR DTALTLERLRLDADEKRAKSRSDKDKKKGVAPWRGSDPNPKDTWRYNVLENDDVVDQVNKIRKKKSYGADVDEISRNARS RVKSGQNILNHTRRSQTYIPPLNLMPEALLSDSAASMYNRPAWATQTAPYVSFDATVMDKNNRNKSRPRSTSPPKPGSRP MTARSERDPPTTQLFPEKPWTVPDSQDSDEEQ |
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