Gene
| Gene Model ID | pfu_aug2.0_37.1_23299 |
|---|---|
| Locus | scaffold37.1 : 279586 ... 292935 : + |
| To GenomeBrowser | scaffold37.1:279586..292935 |
| Genes list of scaffold | scaffold37.1 |
| Synonym | pfu_aug1.0_2013.1_22832 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| clathrin light chain a-like | GO:0016020 GO:0044424 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_37.1_23299.t1 | 1 | 1 | Clathrin_lg_ch | 2 | 222 | 0.0 | 195.4 | 0.0 | 0.0 | 195.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_37.1_23299.t1 | gi|676486613|ref|XP_009064031.1| | hypothetical protein LOTGIDRAFT_195870 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_37.1_23299.t1 | gi|524886287|ref|XP_005099740.1| | PREDICTED: clathrin light chain B-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_37.1_23299.t1 | gi|524886289|ref|XP_005099741.1| | PREDICTED: clathrin light chain B-like isoform X4 [Aplysia californica] | 0.0 |
| pfu_aug2.0_37.1_23299.t1 | gi|524886285|ref|XP_005099739.1| | PREDICTED: clathrin light chain B-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_37.1_23299.t1 | gi|72136156|ref|XP_796327.1| | PREDICTED: clathrin light chain A [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_37.1_23299.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23299.t1 atggcagactttgatgcattttcgtcgaatgaccaagttcctcagaacattgaagaggatccggccgctgatttcttggc tagagaacaaacagaacttgcaggattagaagatgacaatttcggcacagataattcagtacctcaaggagatcagggaa atgattttgatccatttggaggacagtcttcagaaccggtgaccaatggagacatgggaggtgggtcacttacagacgac cttggatttggtgggggttcagaggaaccacagacgaatggtccaacagacatgtatgctgctgtgtcccaggtggacag gcagagggcagagcccgagaagctgaggatttggagagaaaatcaagaagtcatgttacagaagaaagacgaagaagagg ccgagaagaaagaagaatggagagaaatggccaagaaggaagtagacgactggtacaaacatcacggtgaacaagtggag aagactaaagaaacaaatcgggccgcggaggcttcctttgtaaaggacagggatactacacaaccaggaggcgagtggga gaaaatttgccgattgtgtgaattcaacccgaagaattccaaaaatacaaaagacgtatcgaggatgagatcaattttgt tgcaacttaagcagactcccttagttcgatga |
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Protein
| Protein ID | pfu_aug2.0_37.1_23299.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23299.t1 MADFDAFSSNDQVPQNIEEDPAADFLAREQTELAGLEDDNFGTDNSVPQGDQGNDFDPFGGQSSEPVTNGDMGGGSLTDD LGFGGGSEEPQTNGPTDMYAAVSQVDRQRAEPEKLRIWRENQEVMLQKKDEEEAEKKEEWREMAKKEVDDWYKHHGEQVE KTKETNRAAEASFVKDRDTTQPGGEWEKICRLCEFNPKNSKNTKDVSRMRSILLQLKQTPLVR |
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