Gene
Gene Model ID | pfu_aug2.0_37.1_23299 |
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Locus | scaffold37.1 : 279586 ... 292935 : + |
To GenomeBrowser | scaffold37.1:279586..292935 |
Genes list of scaffold | scaffold37.1 |
Synonym | pfu_aug1.0_2013.1_22832 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
clathrin light chain a-like | GO:0016020 GO:0044424 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_37.1_23299.t1 | 1 | 1 | Clathrin_lg_ch | 2 | 222 | 0.0 | 195.4 | 0.0 | 0.0 | 195.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_37.1_23299.t1 | gi|676486613|ref|XP_009064031.1| | hypothetical protein LOTGIDRAFT_195870 [Lottia gigantea] | 0.0 |
pfu_aug2.0_37.1_23299.t1 | gi|524886287|ref|XP_005099740.1| | PREDICTED: clathrin light chain B-like isoform X3 [Aplysia californica] | 0.0 |
pfu_aug2.0_37.1_23299.t1 | gi|524886289|ref|XP_005099741.1| | PREDICTED: clathrin light chain B-like isoform X4 [Aplysia californica] | 0.0 |
pfu_aug2.0_37.1_23299.t1 | gi|524886285|ref|XP_005099739.1| | PREDICTED: clathrin light chain B-like isoform X2 [Aplysia californica] | 0.0 |
pfu_aug2.0_37.1_23299.t1 | gi|72136156|ref|XP_796327.1| | PREDICTED: clathrin light chain A [Strongylocentrotus purpuratus] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_37.1_23299.t1 |
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Definition | - |
>pfu_aug2.0_37.1_23299.t1 atggcagactttgatgcattttcgtcgaatgaccaagttcctcagaacattgaagaggatccggccgctgatttcttggc tagagaacaaacagaacttgcaggattagaagatgacaatttcggcacagataattcagtacctcaaggagatcagggaa atgattttgatccatttggaggacagtcttcagaaccggtgaccaatggagacatgggaggtgggtcacttacagacgac cttggatttggtgggggttcagaggaaccacagacgaatggtccaacagacatgtatgctgctgtgtcccaggtggacag gcagagggcagagcccgagaagctgaggatttggagagaaaatcaagaagtcatgttacagaagaaagacgaagaagagg ccgagaagaaagaagaatggagagaaatggccaagaaggaagtagacgactggtacaaacatcacggtgaacaagtggag aagactaaagaaacaaatcgggccgcggaggcttcctttgtaaaggacagggatactacacaaccaggaggcgagtggga gaaaatttgccgattgtgtgaattcaacccgaagaattccaaaaatacaaaagacgtatcgaggatgagatcaattttgt tgcaacttaagcagactcccttagttcgatga |
Protein
Protein ID | pfu_aug2.0_37.1_23299.t1 |
---|---|
Definition | - |
>pfu_aug2.0_37.1_23299.t1 MADFDAFSSNDQVPQNIEEDPAADFLAREQTELAGLEDDNFGTDNSVPQGDQGNDFDPFGGQSSEPVTNGDMGGGSLTDD LGFGGGSEEPQTNGPTDMYAAVSQVDRQRAEPEKLRIWRENQEVMLQKKDEEEAEKKEEWREMAKKEVDDWYKHHGEQVE KTKETNRAAEASFVKDRDTTQPGGEWEKICRLCEFNPKNSKNTKDVSRMRSILLQLKQTPLVR |