Gene
| Gene Model ID | pfu_aug2.0_37.1_23300 |
|---|---|
| Locus | scaffold37.1 : 299607 ... 316045 : - |
| To GenomeBrowser | scaffold37.1:299607..316045 |
| Genes list of scaffold | scaffold37.1 |
| Synonym | pfu_aug1.0_2013.1_22834 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| hydroxyacid-oxoacid mitochondrial | GO:0005739 GO:0015993 GO:0046872 GO:0047988 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_37.1_23300.t1 | 1 | 1 | Fe-ADH | 50 | 454 | 0.0 | 344.2 | 0.0 | 0.0 | 344.0 |
| pfu_aug2.0_37.1_23300.t1 | 2 | 1 | Fe-ADH_2 | 54 | 147 | 3.9e-13 | 49.2 | 6.3e-15 | 3.1e-11 | 43.0 |
| pfu_aug2.0_37.1_23300.t1 | 2 | 2 | Fe-ADH_2 | 275 | 331 | 3.9e-13 | 49.2 | 0.0041 | 20.0 | 4.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_37.1_23300.t1 | gi|632958271|ref|XP_007894941.1| | PREDICTED: hydroxyacid-oxoacid transhydrogenase, mitochondrial [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_37.1_23300.t1 | gi|657598736|ref|XP_008304159.1| | PREDICTED: hydroxyacid-oxoacid transhydrogenase, mitochondrial [Stegastes partitus] | 0.0 |
| pfu_aug2.0_37.1_23300.t1 | gi|658922309|ref|XP_008400883.1| | PREDICTED: hydroxyacid-oxoacid transhydrogenase, mitochondrial isoform X1 [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_37.1_23300.t1 | gi|676432631|ref|XP_009046637.1| | hypothetical protein LOTGIDRAFT_138069 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_37.1_23300.t1 | gi|597751632|ref|XP_007237697.1| | PREDICTED: hydroxyacid-oxoacid transhydrogenase, mitochondrial [Astyanax mexicanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_37.1_23300.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23300.t1 atggctgggatctgtaaaagagcaagtgacaactttattcgttgtcttcttaacaaaaattcattatcagtcctgtcttc catgcaaattagagcaaattatggaactaatccaccacagaaagagtttgcttatgagatggcttgctctaacatcagat atggagagggagtaactagagaagttggactggactgtcagaaccttggtggtaggaatgtatgtgtgatgacagacagc aagcttgttaacatgaaaccagtacacactgtgttagagtccttagatgacaacaaggtcaaatacaagttgtttgatag atgcagggtagaaccaactaacgagagttatgaagatgccatcaactttgccaagtctgaagattttgacgtgtttgttg ctgtaggagggggttcggtaatggacacgtgtaaagctgccaatctgtattcgaccaatccctccgcagaactactggat tatgtgaatgctccggtcggtaaaggattacctgtaacccatcaacttaaacctctgatagcaataaccacgactgctgg cactggaagtgagactacaggaaccgctgtatttgattacctcccaatgaaagctaagacaggaatatccaatcgagctc tgcggcccaccttaggcattgttgatcctctacatttattagagatgccggagagagtgaccgcctacagtggaattgat gtactgtgccatgctattgaatcgtttacagctatcccatacaatgagagggtaccatacccagccaatccaaacttaag gcccgcctaccagggatgtaacccaatcagtgatatctggtcaaagcatgctcttacaatgacggcaaagtatctcaaac gtgcagtatatgacccatcagataaagaggcgcggtctgttatgggtttagcgtcatgctatgccggtataggatttggt aatgctggggtacacctttgccatggtatgtcttatcctatatctggtctgaacagagactacaggtccaaagattacag tcaggatcataaactagtgccccatggattatcagtcgtgatatctgctccagcagtgtttgagttcactgcccctgctt gtccagagcgccacctggaggcagcttctcttctaggtgcggatgtgacaaacaagaagaatgcagatgcaggtgcagtt ctaggagataaactaagggagataatgagagatctagaaattcctgatgggataactgctctagggtttacaaaggatga catacctgccttggttcaaggaactctgccacagcacagagttattaagttatcaccaagacctgccggagaggaggaaa ttacagaaatcttcaataactgtctaaaagtatattaa |
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Protein
| Protein ID | pfu_aug2.0_37.1_23300.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23300.t1 MAGICKRASDNFIRCLLNKNSLSVLSSMQIRANYGTNPPQKEFAYEMACSNIRYGEGVTREVGLDCQNLGGRNVCVMTDS KLVNMKPVHTVLESLDDNKVKYKLFDRCRVEPTNESYEDAINFAKSEDFDVFVAVGGGSVMDTCKAANLYSTNPSAELLD YVNAPVGKGLPVTHQLKPLIAITTTAGTGSETTGTAVFDYLPMKAKTGISNRALRPTLGIVDPLHLLEMPERVTAYSGID VLCHAIESFTAIPYNERVPYPANPNLRPAYQGCNPISDIWSKHALTMTAKYLKRAVYDPSDKEARSVMGLASCYAGIGFG NAGVHLCHGMSYPISGLNRDYRSKDYSQDHKLVPHGLSVVISAPAVFEFTAPACPERHLEAASLLGADVTNKKNADAGAV LGDKLREIMRDLEIPDGITALGFTKDDIPALVQGTLPQHRVIKLSPRPAGEEEITEIFNNCLKVY |
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