Gene
| Gene Model ID | pfu_aug2.0_37.1_23305 |
|---|---|
| Locus | scaffold37.1 : 428777 ... 446142 : + |
| To GenomeBrowser | scaffold37.1:428777..446142 |
| Genes list of scaffold | scaffold37.1 |
| Synonym | pfu_aug1.0_22259.1_54815 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| negative elongation factor b | GO:0005634 GO:0045892 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_37.1_23305.t1 | 1 | 1 | COBRA1 | 104 | 566 | 0.0 | 703.5 | 0.0 | 0.0 | 703.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_37.1_23305.t1 | gi|676469536|ref|XP_009058564.1| | hypothetical protein LOTGIDRAFT_227518 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_37.1_23305.t1 | gi|260828669|ref|XP_002609285.1| | hypothetical protein BRAFLDRAFT_124742 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_37.1_23305.t1 | gi|157106897|ref|XP_001649534.1| | AAEL014752-PA [Aedes aegypti] | 0.0 |
| pfu_aug2.0_37.1_23305.t1 | gi|512935973|ref|XP_004933406.1| | PREDICTED: negative elongation factor B [Bombyx mori] | 0.0 |
| pfu_aug2.0_37.1_23305.t1 | gi|557772510|ref|XP_005185910.1| | PREDICTED: negative elongation factor B [Musca domestica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_37.1_23305.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23305.t1 atgtccggtcttgaggaattgggtattcctggtggggaggcactcagagaatccctcactaattgtgccgaccctctggc ttccattgaagaattccaggccgaaaatagtatcctgttaccatctttaaaaccagctttacattttcttgatctccatg aaattaaacgtctggatttccataactcagtgttggaggagttacgggaaaaattaattcaacaaatatctgatgttgcc aatagagaggatgatgacagatttacagtactggaatcgctcttggaaaaaagttttccagtcataaaggtaaaaagttt acgacctgttgtcatggcaatattgaagcacctgccagaaattaaagatgaatatttagagaagatattggatgataaag aactttatgcggaagcagccacagaagtcaagaggcaaatatgggcagacaaccaggctctgtttggggacgaagtgtca ccacttttgtcacagtatatcaaagaaaaggaaaattccctctttactcacgagaacagttcacatacatttttcattcc tgcaccaaagattaggagacaaagtgaagttgtgcaacaattggccaatatggttggcaagaacattaaattgtacgata tggtgctgcagtttctacgaactttgtttctacgcacaagaaatactcattactgtacgttgagagccgaacttttaatg actttgcacgaccaggaggtgaatgatatttgctccatagatccttgtcacaagttcacttggtgtgtggacgcgtgtat aagggacaaattcatagatgccaaacgttcaagagaacttcaaggctttttggacgggataaagaggggccaggaatttg ttttaggggacctgtcaatgatactgtgtgatccgtttgcactgaacactgtggccctgtccatgatgaagaacctccag cattgtatcaatacagatggacttcctagagagagtgcggagattttattgttggttagaatgttatcacttggcttggg atcatgggatatgatagacagtcagctttttagggagcctaaattggagtcggccctgttcactaagttcttaccaatga taacctccatgatgatagatgatcaagtacgagccctaaatgtgaagatggaagaccctcgacaacccgtccaaccaccc tctgatctattcttagcattcattaaggaaaatgcaattgctagtatgattgcgctgtattacacattgcaggttacaag acagaaggatcgggtggctgcatgtaacatagtacctgtattagtacactgtgaaaatgagaggtcgtatgacgacacgt ttctccattctttcatctcctatcttatagccatggcagaagaattttgctcggaggatttttgtgttgccgtttttgat gatttcatattgccagcaatatctagagagaatgttttacggcatttactgagactgttgtggtacatccatcccaagct acctactggcaggttacaggctctactagacagtacacagccaaacaatgagcatagtgaagcagtgcactctacatacc tccagttaatggacaaggtgaacacatacgagccgagccctgtagctcctcaggagcagcttgattctcccctgatgagt gtacctacaccagctcccatacactga |
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Protein
| Protein ID | pfu_aug2.0_37.1_23305.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23305.t1 MSGLEELGIPGGEALRESLTNCADPLASIEEFQAENSILLPSLKPALHFLDLHEIKRLDFHNSVLEELREKLIQQISDVA NREDDDRFTVLESLLEKSFPVIKVKSLRPVVMAILKHLPEIKDEYLEKILDDKELYAEAATEVKRQIWADNQALFGDEVS PLLSQYIKEKENSLFTHENSSHTFFIPAPKIRRQSEVVQQLANMVGKNIKLYDMVLQFLRTLFLRTRNTHYCTLRAELLM TLHDQEVNDICSIDPCHKFTWCVDACIRDKFIDAKRSRELQGFLDGIKRGQEFVLGDLSMILCDPFALNTVALSMMKNLQ HCINTDGLPRESAEILLLVRMLSLGLGSWDMIDSQLFREPKLESALFTKFLPMITSMMIDDQVRALNVKMEDPRQPVQPP SDLFLAFIKENAIASMIALYYTLQVTRQKDRVAACNIVPVLVHCENERSYDDTFLHSFISYLIAMAEEFCSEDFCVAVFD DFILPAISRENVLRHLLRLLWYIHPKLPTGRLQALLDSTQPNNEHSEAVHSTYLQLMDKVNTYEPSPVAPQEQLDSPLMS VPTPAPIH |
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