Gene
| Gene Model ID | pfu_aug2.0_37.1_23306 |
|---|---|
| Locus | scaffold37.1 : 446144 ... 467496 : - |
| To GenomeBrowser | scaffold37.1:446144..467496 |
| Genes list of scaffold | scaffold37.1 |
| Synonym | pfu_aug1.0_41619.1_34209 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| high affinity copper uptake protein 1 isoform x2 | GO:0009987 GO:0050896 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_37.1_23306.t2 | 1 | 1 | Ctr | 110 | 243 | 1.6e-40 | 138.4 | 3.36312e-44 | 2.5e-40 | 137.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_37.1_23306.t2 | gi|189234241|ref|XP_976116.2| | PREDICTED: high affinity copper uptake protein 1 isoform X2 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_37.1_23306.t2 | gi|752893612|ref|XP_011264953.1| | PREDICTED: high affinity copper uptake protein 1 isoform X2 [Camponotus floridanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_37.1_23306.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23306.t1 atggcaaagccccagaagctaacttctgctaagcaaaaacgcttgaccacagagatccaaacactggggaaaagctcctg tttcgggggcgtattagtattttctgtttgcgtcaccggattgttctttatttattcgtcaaagaagcctccaaagttca aactattcacgaagatgtcgatgcatcacggccacggcacgggaggaatgagcatgggaatgaacgggtccacaaccccc ggtatgaacatggacatggatccccacggtgggatgatgggaatggacccacatatgcatatgaaccataccgatacagg tcatggaatgcagatgttctttcacaccggagtgtcggagtacatcctttttgaacagcttttaacatcaagtgcaggag agatggtgggagcttgtgtagccattttcttccttgctgttctatacgaaggtctcaaagttatgagggaacaattactg aaatcagcgttcagctcctcgatgaagtacagagaagttaccatttcatcacaaacctcacaggataacatcatcataga tccaaaaagtaacggaagcgtagacaaagtcagcaccaatcaacatccagattacatttttcaaaagccaaaaggattcc gtatgctgagttcctctcatttcatacagacggcgctgcacgtggtccaggtttttgtcagctattgcctgatgttggtc ttcatgacgtacaacgtttggttatgtttagcggttatcctaggtgctggtgctggttatttcctattcggttggaaacg agcggttgtcgtggacgtaaacgaacattgccactag |
|
| Transcript ID | pfu_aug2.0_37.1_23306.t2 |
| Definition | - |
>pfu_aug2.0_37.1_23306.t2 atggcaaagccccagaagctaacttctgctaagcaaaaacgcttgaccacagagatccaaacactggggaaaagctcctg tttcgggggcgtattagtattttctgtttgcgtcaccggattgttctttatttattcgtcaaagaagcctccaaagttca aactattcacgaagatgtcgatgcatcacggccacggcacgggaggaatgagcatgggaatgaacgggtccacaaccccc ggtatgaacatggacatggatccccacggtgggatgatgggaatggacccacatatgcatatgaaccataccgatacagg tcatggaatgcagatgttctttcacaccggagtgtcggagtacatcctttttgaacagcttttaacatcaagtgcaggag agatggtgggagcttgtgtagccattttcttccttgctgttctatacgaaggtctcaaagttatgagggaacaattactg aaatcagcgttcagctcctcgatgaagtacagagaagttaccatttcatcacaaacctcacaggataacatcatcataga tccaaaaagtaacggattccgtatgctgagttcctctcatttcatacagacggcgctgcacgtggtccaggtttttgtca gctattgcctgatgttggtcttcatgacgtacaacgtttggttatgtttagcggttatcctaggtgctggtgctggttat ttcctattcggttggaaacgagcggttgtcgtggacgtaaacgaacattgccactag |
|
Protein
| Protein ID | pfu_aug2.0_37.1_23306.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23306.t1 MAKPQKLTSAKQKRLTTEIQTLGKSSCFGGVLVFSVCVTGLFFIYSSKKPPKFKLFTKMSMHHGHGTGGMSMGMNGSTTP GMNMDMDPHGGMMGMDPHMHMNHTDTGHGMQMFFHTGVSEYILFEQLLTSSAGEMVGACVAIFFLAVLYEGLKVMREQLL KSAFSSSMKYREVTISSQTSQDNIIIDPKSNGSVDKVSTNQHPDYIFQKPKGFRMLSSSHFIQTALHVVQVFVSYCLMLV FMTYNVWLCLAVILGAGAGYFLFGWKRAVVVDVNEHCH |
|
| Protein ID | pfu_aug2.0_37.1_23306.t2 |
| Definition | - |
>pfu_aug2.0_37.1_23306.t2 MAKPQKLTSAKQKRLTTEIQTLGKSSCFGGVLVFSVCVTGLFFIYSSKKPPKFKLFTKMSMHHGHGTGGMSMGMNGSTTP GMNMDMDPHGGMMGMDPHMHMNHTDTGHGMQMFFHTGVSEYILFEQLLTSSAGEMVGACVAIFFLAVLYEGLKVMREQLL KSAFSSSMKYREVTISSQTSQDNIIIDPKSNGFRMLSSSHFIQTALHVVQVFVSYCLMLVFMTYNVWLCLAVILGAGAGY FLFGWKRAVVVDVNEHCH |
|