Gene
| Gene Model ID | pfu_aug2.0_37.1_23308 |
|---|---|
| Locus | scaffold37.1 : 501518 ... 511404 : - |
| To GenomeBrowser | scaffold37.1:501518..511404 |
| Genes list of scaffold | scaffold37.1 |
| Synonym | pfu_aug1.0_6323.1_45415 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_37.1_23308.t1 | 2 | 1 | DNase_II | 48 | 218 | 0.0 | 265.5 | 0.0 | 0.0 | 157.8 |
| pfu_aug2.0_37.1_23308.t1 | 2 | 2 | DNase_II | 240 | 351 | 0.0 | 265.5 | 1.4e-35 | 2.1e-31 | 109.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_37.1_23308.t1 | gi|675879866|ref|XP_009025454.1| | hypothetical protein HELRODRAFT_107427 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_37.1_23308.t1 | gi|390341958|ref|XP_003725560.1| | 0.0 | |
| pfu_aug2.0_37.1_23308.t1 | gi|58332460|ref|NP_001011305.1| | deoxyribonuclease-2-beta [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_37.1_23308.t1 | gi|700322916|ref|XP_009928014.1| | PREDICTED: deoxyribonuclease-2-beta isoform X1 [Haliaeetus albicilla] | 0.0 |
| pfu_aug2.0_37.1_23308.t1 | gi|704280940|ref|XP_010165495.1| | PREDICTED: deoxyribonuclease-2-beta [Caprimulgus carolinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_37.1_23308.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23308.t1 atgatcgagtcgcttgtgatgagaaagataaggaatgtcatctacaataaatacagtactttcgctatcacgatgacacg gacatggggtgcagtaggcgttgtcctggtttttagcctcgttaaccctggttctgcgcttgattgtcgctcccaagatg ggtccgccgtggactggtttgctgtatacaaaatgccaattttaccaggaaatgtcaacaagcttgccagtgacggtgtg gcttactattatatggacagtgacaatcccacatggacgttatctaacgtgggcatcaatgaaatgcagggaaatgccgt ctaccatacactccaacagatctatggtgaaaaagacctagacagtatcacatatgcaatgtataatgacgaaactcctg taggaacagtgtccatcactcatggacacactaaaggggcctttgcttttgatgcatcgagtgggttctggttaattgtc agcgtaccgaagtttcctaatattcgtacgggcggctatcagtaccctaaaagtgggttaacatatggacagacaatgct gtgtgtcagtctgaacaacacggagctcgaagacgtgggtgagtataactcattactcatgttgtgtgtcagtctaaaca acacggagctagaagatatgggtgagtttaactcattactcatgttgtgtgtcagtctaaacaatacagagctagaagat atggatttgtatgatgcctgggtaaatgagcgtattaaccataatctcctggttgaaacatggcagaatggacctaaaga aaacttcattagatctaactgtacggagacatataaagtatacaatgtacaggaggtcatatttcctgtgggaagttttg atgaaactaaggaccattctaagtgggcagtatcaaggactggtaaatggacgtgcattggtgacatcaacagacagtat ccccagttcaaaagaggagggagtactatgtgttttgtaaataccaaagtttggagtgaatttacccaaaggatcagaga ctatgagacctgtggacctgcataa |
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Protein
| Protein ID | pfu_aug2.0_37.1_23308.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23308.t1 MIESLVMRKIRNVIYNKYSTFAITMTRTWGAVGVVLVFSLVNPGSALDCRSQDGSAVDWFAVYKMPILPGNVNKLASDGV AYYYMDSDNPTWTLSNVGINEMQGNAVYHTLQQIYGEKDLDSITYAMYNDETPVGTVSITHGHTKGAFAFDASSGFWLIV SVPKFPNIRTGGYQYPKSGLTYGQTMLCVSLNNTELEDVGEYNSLLMLCVSLNNTELEDMGEFNSLLMLCVSLNNTELED MDLYDAWVNERINHNLLVETWQNGPKENFIRSNCTETYKVYNVQEVIFPVGSFDETKDHSKWAVSRTGKWTCIGDINRQY PQFKRGGSTMCFVNTKVWSEFTQRIRDYETCGPA |
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