Gene
Gene Model ID | pfu_aug2.0_37.1_23309 |
---|---|
Locus | scaffold37.1 : 511451 ... 529804 : - |
To GenomeBrowser | scaffold37.1:511451..529804 |
Genes list of scaffold | scaffold37.1 |
Synonym | pfu_aug1.0_6323.1_45416 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_37.1_23309.t1 | 4 | 1 | DNase_II | 11 | 136 | 0.0 | 296.5 | 2.50006e-41 | 9.3e-38 | 130.0 |
pfu_aug2.0_37.1_23309.t1 | 4 | 2 | DNase_II | 141 | 158 | 0.0 | 296.5 | 0.023 | 84.0 | 2.0 |
pfu_aug2.0_37.1_23309.t1 | 4 | 3 | DNase_II | 173 | 269 | 0.0 | 296.5 | 5.1e-29 | 1.9e-25 | 89.5 |
pfu_aug2.0_37.1_23309.t1 | 4 | 4 | DNase_II | 295 | 374 | 0.0 | 296.5 | 2.8e-25 | 1.0e-21 | 77.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_37.1_23309.t1 | gi|505846759|ref|XP_004616852.1| | PREDICTED: deoxyribonuclease-2-alpha-like [Sorex araneus] | 2.0e-36 |
pfu_aug2.0_37.1_23309.t1 | gi|675867424|ref|XP_009019272.1| | hypothetical protein HELRODRAFT_65498, partial [Helobdella robusta] | 6.0e-34 |
Transcript
Transcript ID | pfu_aug2.0_37.1_23309.t1 |
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Definition | - |
>pfu_aug2.0_37.1_23309.t1 atgacagcgtgaaatgtcaacatgcttgccagtgacggggcagcttactattatatggacagtgacaatccgacatggac gttatctaacgtgggcatcaatgaaatgcagggaaatgccgtctatcatacactccaacagatctatgatgaaaaagacc tagacaatatcacctacgcaatgtacaatgacgaaactcctgtaggaacggtgtccatcactcatggacacacaaaaggg gcctttgcttttgacacgtcgagtgggttctggttaattgtcagcgtaccaaagtttcctaatattcgcactggcggcta ccagtaccctaaaagtgggttcagatatggacagacaatgctgtgtgtcagtctgaacaacacggagctcgaagacgtgg gtgagtataactcattactcgtgttgtgtgtcagtctaaacaacacggagctcgaagacgtgggtgagtataactcatta ctcatgttgtgtgtcagtctaaacaacacagaactcgaagacgtggacaatatcacctacgcaatgtacaatgacgaaac tcctgtaggaacggtgtccatcactcatggacacacaaaaggggcctttgcttttgacacgtcgagtgggttctggttaa ttgtcagcgtaccaaagtttcctaatattcgcactggcggctaccagtaccctaaaagtgggttcagatatggacagaca atgctgtgtgtcagtctgaacaacacggagctcgaagacgtgggtgagtataactcattactcgtgttgtgtgtcagtct aaacaacacggagctcgaagacgtgggtgagtataactcattactcatgttgtgtgtcagtctaaacaacacagaactcg aagacgtggatttgtatgatgcttgggtaaatgagcgtattaaccataatctccttgttgaaacatggcagaatggacca aaaatatacttcatcaggtctaactgtacggagacatataaagtatacaatgtacaggaggtcgcatttcctgtgggcag ttttcataaaactaaggaccattctaagtgggcagtatcaaggactggtaaatggacgtgcattggtgacatcaacagac aggtctaa |
Protein
Protein ID | pfu_aug2.0_37.1_23309.t1 |
---|---|
Definition | - |
>pfu_aug2.0_37.1_23309.t1 MTAXNVNMLASDGAAYYYMDSDNPTWTLSNVGINEMQGNAVYHTLQQIYDEKDLDNITYAMYNDETPVGTVSITHGHTKG AFAFDTSSGFWLIVSVPKFPNIRTGGYQYPKSGFRYGQTMLCVSLNNTELEDVGEYNSLLVLCVSLNNTELEDVGEYNSL LMLCVSLNNTELEDVDNITYAMYNDETPVGTVSITHGHTKGAFAFDTSSGFWLIVSVPKFPNIRTGGYQYPKSGFRYGQT MLCVSLNNTELEDVGEYNSLLVLCVSLNNTELEDVGEYNSLLMLCVSLNNTELEDVDLYDAWVNERINHNLLVETWQNGP KIYFIRSNCTETYKVYNVQEVAFPVGSFHKTKDHSKWAVSRTGKWTCIGDINRQV |