Gene
| Gene Model ID | pfu_aug2.0_37.1_23309 |
|---|---|
| Locus | scaffold37.1 : 511451 ... 529804 : - |
| To GenomeBrowser | scaffold37.1:511451..529804 |
| Genes list of scaffold | scaffold37.1 |
| Synonym | pfu_aug1.0_6323.1_45416 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_37.1_23309.t1 | 4 | 1 | DNase_II | 11 | 136 | 0.0 | 296.5 | 2.50006e-41 | 9.3e-38 | 130.0 |
| pfu_aug2.0_37.1_23309.t1 | 4 | 2 | DNase_II | 141 | 158 | 0.0 | 296.5 | 0.023 | 84.0 | 2.0 |
| pfu_aug2.0_37.1_23309.t1 | 4 | 3 | DNase_II | 173 | 269 | 0.0 | 296.5 | 5.1e-29 | 1.9e-25 | 89.5 |
| pfu_aug2.0_37.1_23309.t1 | 4 | 4 | DNase_II | 295 | 374 | 0.0 | 296.5 | 2.8e-25 | 1.0e-21 | 77.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_37.1_23309.t1 | gi|505846759|ref|XP_004616852.1| | PREDICTED: deoxyribonuclease-2-alpha-like [Sorex araneus] | 2.0e-36 |
| pfu_aug2.0_37.1_23309.t1 | gi|675867424|ref|XP_009019272.1| | hypothetical protein HELRODRAFT_65498, partial [Helobdella robusta] | 6.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_37.1_23309.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23309.t1 atgacagcgtgaaatgtcaacatgcttgccagtgacggggcagcttactattatatggacagtgacaatccgacatggac gttatctaacgtgggcatcaatgaaatgcagggaaatgccgtctatcatacactccaacagatctatgatgaaaaagacc tagacaatatcacctacgcaatgtacaatgacgaaactcctgtaggaacggtgtccatcactcatggacacacaaaaggg gcctttgcttttgacacgtcgagtgggttctggttaattgtcagcgtaccaaagtttcctaatattcgcactggcggcta ccagtaccctaaaagtgggttcagatatggacagacaatgctgtgtgtcagtctgaacaacacggagctcgaagacgtgg gtgagtataactcattactcgtgttgtgtgtcagtctaaacaacacggagctcgaagacgtgggtgagtataactcatta ctcatgttgtgtgtcagtctaaacaacacagaactcgaagacgtggacaatatcacctacgcaatgtacaatgacgaaac tcctgtaggaacggtgtccatcactcatggacacacaaaaggggcctttgcttttgacacgtcgagtgggttctggttaa ttgtcagcgtaccaaagtttcctaatattcgcactggcggctaccagtaccctaaaagtgggttcagatatggacagaca atgctgtgtgtcagtctgaacaacacggagctcgaagacgtgggtgagtataactcattactcgtgttgtgtgtcagtct aaacaacacggagctcgaagacgtgggtgagtataactcattactcatgttgtgtgtcagtctaaacaacacagaactcg aagacgtggatttgtatgatgcttgggtaaatgagcgtattaaccataatctccttgttgaaacatggcagaatggacca aaaatatacttcatcaggtctaactgtacggagacatataaagtatacaatgtacaggaggtcgcatttcctgtgggcag ttttcataaaactaaggaccattctaagtgggcagtatcaaggactggtaaatggacgtgcattggtgacatcaacagac aggtctaa |
|
Protein
| Protein ID | pfu_aug2.0_37.1_23309.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23309.t1 MTAXNVNMLASDGAAYYYMDSDNPTWTLSNVGINEMQGNAVYHTLQQIYDEKDLDNITYAMYNDETPVGTVSITHGHTKG AFAFDTSSGFWLIVSVPKFPNIRTGGYQYPKSGFRYGQTMLCVSLNNTELEDVGEYNSLLVLCVSLNNTELEDVGEYNSL LMLCVSLNNTELEDVDNITYAMYNDETPVGTVSITHGHTKGAFAFDTSSGFWLIVSVPKFPNIRTGGYQYPKSGFRYGQT MLCVSLNNTELEDVGEYNSLLVLCVSLNNTELEDVGEYNSLLMLCVSLNNTELEDVDLYDAWVNERINHNLLVETWQNGP KIYFIRSNCTETYKVYNVQEVAFPVGSFHKTKDHSKWAVSRTGKWTCIGDINRQV |
|