Gene
| Gene Model ID | pfu_aug2.0_37.1_23310 |
|---|---|
| Locus | scaffold37.1 : 529856 ... 539334 : - |
| To GenomeBrowser | scaffold37.1:529856..539334 |
| Genes list of scaffold | scaffold37.1 |
| Synonym | pfu_aug1.0_9193.1_17449 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| deoxyribonuclease ii | GO:0006259 GO:0016787 GO:0044699 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_37.1_23310.t1 | 1 | 1 | DNase_II | 24 | 273 | 0.0 | 240.5 | 0.0 | 0.0 | 240.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_37.1_23310.t1 | gi|524872108|ref|XP_005092819.1| | PREDICTED: plancitoxin-1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_37.1_23310.t1 | gi|676462688|ref|XP_009056350.1| | hypothetical protein LOTGIDRAFT_206546 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_37.1_23310.t1 | gi|545809075|ref|XP_005652925.1| | PREDICTED: deoxyribonuclease-2-alpha isoform X2 [Sus scrofa] | 0.0 |
| pfu_aug2.0_37.1_23310.t1 | gi|545809073|ref|XP_005652924.1| | PREDICTED: deoxyribonuclease-2-alpha isoform X1 [Sus scrofa] | 0.0 |
| pfu_aug2.0_37.1_23310.t1 | gi|47523470|ref|NP_999361.1| | deoxyribonuclease-2-alpha precursor [Sus scrofa] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_37.1_23310.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23310.t1 atgaataaaaaagatttagtagaaaatgatgtctccatttccagacaatccgaaaatcaccagacataccagtcggagtc tcttaatcacggtcacacaaaaggagcatttgcctttgagaagacaggaggtttctggatgatctctagtattccacatt ttccgtcaccaaagaaactaggatatttatatcctaaaagtggcagagataatggacagaccattctatgcatcagtctg aaatacggatctatggatgacatagccaagataatgcagttcacataccccaagttctatgactacaatttaccgaaaag ttttgctgatgcttctcgggcaatgacagccatattgaataaaaaacaagagcatgtgaccacacctccataccaagggc agacaactcttcaaagcaaagcaggacagaaattcctaaactttgctaaagcaggaaattttgaagcagatttatacgac tcatttgtctcgtgccaattgaagaacgatttgcaagtggagacttggcagaatggagaaaaatccaaagtattgccgtc aaactgtagcgttaagtgtgaaggttactcatcaacacgatcggtatttaacataaacagcatatctatccaagatgaca atttcaaggagacaaaggaccattctaaatgggcagtgtctaaaactgaccaatgggtatgcattggagatataaataga ctggaaactcagttccacagaggtggtgctacgacttgcttccagaacggccaggttcataaaggatttacacaaatcat agcagggtacaacaagtgtggaacatttaaaaaggacttttttcaaccagtggaattactatcaacatga |
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Protein
| Protein ID | pfu_aug2.0_37.1_23310.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_37.1_23310.t1 MNKKDLVENDVSISRQSENHQTYQSESLNHGHTKGAFAFEKTGGFWMISSIPHFPSPKKLGYLYPKSGRDNGQTILCISL KYGSMDDIAKIMQFTYPKFYDYNLPKSFADASRAMTAILNKKQEHVTTPPYQGQTTLQSKAGQKFLNFAKAGNFEADLYD SFVSCQLKNDLQVETWQNGEKSKVLPSNCSVKCEGYSSTRSVFNINSISIQDDNFKETKDHSKWAVSKTDQWVCIGDINR LETQFHRGGATTCFQNGQVHKGFTQIIAGYNKCGTFKKDFFQPVELLST |
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