Gene
Gene Model ID | pfu_aug2.0_37.1_23314 |
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Locus | scaffold37.1 : 582582 ... 609334 : - |
To GenomeBrowser | scaffold37.1:582582..609334 |
Genes list of scaffold | scaffold37.1 |
Synonym | pfu_aug1.0_10147.1_24687 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_37.1_23314.t1 | 1 | 1 | CAP | 348 | 467 | 8.3e-12 | 45.6 | 1.3e-15 | 2.0e-11 | 44.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_37.1_23314.t1 | gi|585649172|ref|XP_006814338.1| | PREDICTED: golgi-associated plant pathogenesis-related protein 1-like [Saccoglossus kowalevskii] | 5.0e-36 |
pfu_aug2.0_37.1_23314.t1 | gi|312067133|ref|XP_003136599.1| | hypothetical protein LOAG_01011 [Loa loa] | 2.0e-29 |
pfu_aug2.0_37.1_23314.t1 | gi|71987021|ref|NP_001024544.1| | F09B9.5 [Caenorhabditis elegans] | 2.0e-27 |
pfu_aug2.0_37.1_23314.t1 | gi|268578401|ref|XP_002644183.1| | Hypothetical protein CBG17161 [Caenorhabditis briggsae] | 3.0e-27 |
pfu_aug2.0_37.1_23314.t1 | gi|268557066|ref|XP_002636522.1| | Hypothetical protein CBG23203 [Caenorhabditis briggsae] | 5.0e-27 |
Transcript
Transcript ID | pfu_aug2.0_37.1_23314.t1 |
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Definition | - |
>pfu_aug2.0_37.1_23314.t1 atggacatccttagacaaaggcggttacaattactagcgccacggtcctttgacaacaagattcgattcccgcagtattg taacttccctgactatgtcaccggaagtctgtctaaaagatttattccagaattgcctcccctgaaagacgtatatgact ttcgttgtcgtaatgcttttatagagcaatggagagatgccgatttgtcgcgacgaaaatgtgcctcgatctcagaatct acgaagagtgatagcggagctagagaaaatgaaggaaccggaaggctgatggagcattctgtnaaaaaaaaaaaaaaaaa aaaaaaagaagatgtttttcaccgcatgaaaatctttccgttttctaaaaagaaatcattgcaacacgatcataagcctt tcagttttaaggatgggtatccatacaatttcgaaagactgagcccaggagaaagttcgtttgacagtggtgttagccat gatgacaccaaaccggacttcaaaggaaacccagatgacttgtacagaagtcccttaggattgcacagtgaaaaacatta taacagaaaaacctctcttttccgacaagctttctcaaactggaaagcgcatcctgtaggaggtgacaaattcaaccata aagaaagatatctctcaccgaagcatttcagtaccactttggatataaataaaaaagacgatcatgcgataaatttcgaa aaatacataattgacaacaagaaatcaaattcttgtcaaagcagacatgactgtaacattccggaaaaacgatcatggct atcaggtttcaagtcactagaagtgctcttttcgggagagtctatctcaagtttgagcaataagataaaggaattttggg gtaccagtgaccaccatcaacagaaaacacacgatgaagctgaccaaaaactccttgagaaactaaaagtgaaagggaac aaaatgattagtggtggctgccggatttatcataattatatagataatgatgaaaacaaagaattcagtgatgaaatggt acgatcccacaatgcacttcgccagtgtcatggttgcagcgacctgtcccaagcagaagatcttagcaaagatgctcaaa tgtgggcagatattattgcagagaaagggttcttacagtacagtgaattgtctggtagaggagaaaatatcatatttctg gatacaaatggactggatcctacaggagcagaggtgaccaaaatgtggtatggtcaacagaaattccacgattttaataa tcctcgatggaggaaagataccatgaatttcagtcaagttgtctggagatcgacgtctgagattggagttggtgtagcca aaatcaaaggccgagacaaaatggtggttgtagctcagtacagaccggccggaaacggaaacatgcccggggaattcaga aagaacgtcccccctccacgtcagtaa |
Protein
Protein ID | pfu_aug2.0_37.1_23314.t1 |
---|---|
Definition | - |
>pfu_aug2.0_37.1_23314.t1 MDILRQRRLQLLAPRSFDNKIRFPQYCNFPDYVTGSLSKRFIPELPPLKDVYDFRCRNAFIEQWRDADLSRRKCASISES TKSDSGARENEGTGRLMEHSXKKKKKKKKEDVFHRMKIFPFSKKKSLQHDHKPFSFKDGYPYNFERLSPGESSFDSGVSH DDTKPDFKGNPDDLYRSPLGLHSEKHYNRKTSLFRQAFSNWKAHPVGGDKFNHKERYLSPKHFSTTLDINKKDDHAINFE KYIIDNKKSNSCQSRHDCNIPEKRSWLSGFKSLEVLFSGESISSLSNKIKEFWGTSDHHQQKTHDEADQKLLEKLKVKGN KMISGGCRIYHNYIDNDENKEFSDEMVRSHNALRQCHGCSDLSQAEDLSKDAQMWADIIAEKGFLQYSELSGRGENIIFL DTNGLDPTGAEVTKMWYGQQKFHDFNNPRWRKDTMNFSQVVWRSTSEIGVGVAKIKGRDKMVVVAQYRPAGNGNMPGEFR KNVPPPRQ |