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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_37.1_23314
Locus scaffold37.1 : 582582 ... 609334 : -
To GenomeBrowser scaffold37.1:582582..609334
Genes list of scaffold scaffold37.1
Synonym pfu_aug1.0_10147.1_24687

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_37.1_23314.t1 1 1 CAP 348 467 8.3e-12 45.6 1.3e-15 2.0e-11 44.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_37.1_23314.t1 gi|585649172|ref|XP_006814338.1| PREDICTED: golgi-associated plant pathogenesis-related protein 1-like [Saccoglossus kowalevskii] 5.0e-36
pfu_aug2.0_37.1_23314.t1 gi|312067133|ref|XP_003136599.1| hypothetical protein LOAG_01011 [Loa loa] 2.0e-29
pfu_aug2.0_37.1_23314.t1 gi|71987021|ref|NP_001024544.1| F09B9.5 [Caenorhabditis elegans] 2.0e-27
pfu_aug2.0_37.1_23314.t1 gi|268578401|ref|XP_002644183.1| Hypothetical protein CBG17161 [Caenorhabditis briggsae] 3.0e-27
pfu_aug2.0_37.1_23314.t1 gi|268557066|ref|XP_002636522.1| Hypothetical protein CBG23203 [Caenorhabditis briggsae] 5.0e-27

Transcript
Transcript IDpfu_aug2.0_37.1_23314.t1
Definition-
>pfu_aug2.0_37.1_23314.t1
atggacatccttagacaaaggcggttacaattactagcgccacggtcctttgacaacaagattcgattcccgcagtattg
taacttccctgactatgtcaccggaagtctgtctaaaagatttattccagaattgcctcccctgaaagacgtatatgact
ttcgttgtcgtaatgcttttatagagcaatggagagatgccgatttgtcgcgacgaaaatgtgcctcgatctcagaatct
acgaagagtgatagcggagctagagaaaatgaaggaaccggaaggctgatggagcattctgtnaaaaaaaaaaaaaaaaa
aaaaaaagaagatgtttttcaccgcatgaaaatctttccgttttctaaaaagaaatcattgcaacacgatcataagcctt
tcagttttaaggatgggtatccatacaatttcgaaagactgagcccaggagaaagttcgtttgacagtggtgttagccat
gatgacaccaaaccggacttcaaaggaaacccagatgacttgtacagaagtcccttaggattgcacagtgaaaaacatta
taacagaaaaacctctcttttccgacaagctttctcaaactggaaagcgcatcctgtaggaggtgacaaattcaaccata
aagaaagatatctctcaccgaagcatttcagtaccactttggatataaataaaaaagacgatcatgcgataaatttcgaa
aaatacataattgacaacaagaaatcaaattcttgtcaaagcagacatgactgtaacattccggaaaaacgatcatggct
atcaggtttcaagtcactagaagtgctcttttcgggagagtctatctcaagtttgagcaataagataaaggaattttggg
gtaccagtgaccaccatcaacagaaaacacacgatgaagctgaccaaaaactccttgagaaactaaaagtgaaagggaac
aaaatgattagtggtggctgccggatttatcataattatatagataatgatgaaaacaaagaattcagtgatgaaatggt
acgatcccacaatgcacttcgccagtgtcatggttgcagcgacctgtcccaagcagaagatcttagcaaagatgctcaaa
tgtgggcagatattattgcagagaaagggttcttacagtacagtgaattgtctggtagaggagaaaatatcatatttctg
gatacaaatggactggatcctacaggagcagaggtgaccaaaatgtggtatggtcaacagaaattccacgattttaataa
tcctcgatggaggaaagataccatgaatttcagtcaagttgtctggagatcgacgtctgagattggagttggtgtagcca
aaatcaaaggccgagacaaaatggtggttgtagctcagtacagaccggccggaaacggaaacatgcccggggaattcaga
aagaacgtcccccctccacgtcagtaa

Protein
Protein IDpfu_aug2.0_37.1_23314.t1
Definition-
>pfu_aug2.0_37.1_23314.t1
MDILRQRRLQLLAPRSFDNKIRFPQYCNFPDYVTGSLSKRFIPELPPLKDVYDFRCRNAFIEQWRDADLSRRKCASISES
TKSDSGARENEGTGRLMEHSXKKKKKKKKEDVFHRMKIFPFSKKKSLQHDHKPFSFKDGYPYNFERLSPGESSFDSGVSH
DDTKPDFKGNPDDLYRSPLGLHSEKHYNRKTSLFRQAFSNWKAHPVGGDKFNHKERYLSPKHFSTTLDINKKDDHAINFE
KYIIDNKKSNSCQSRHDCNIPEKRSWLSGFKSLEVLFSGESISSLSNKIKEFWGTSDHHQQKTHDEADQKLLEKLKVKGN
KMISGGCRIYHNYIDNDENKEFSDEMVRSHNALRQCHGCSDLSQAEDLSKDAQMWADIIAEKGFLQYSELSGRGENIIFL
DTNGLDPTGAEVTKMWYGQQKFHDFNNPRWRKDTMNFSQVVWRSTSEIGVGVAKIKGRDKMVVVAQYRPAGNGNMPGEFR
KNVPPPRQ

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