Gene
| Gene Model ID | pfu_aug2.0_370.1_00660 |
|---|---|
| Locus | scaffold370.1 : 25796 ... 52883 : + |
| To GenomeBrowser | scaffold370.1:25796..52883 |
| Genes list of scaffold | scaffold370.1 |
| Synonym | pfu_aug1.0_11761.1_68401 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_370.1_00660.t1 | 2 | 1 | Arrestin_N | 7 | 147 | 6.0e-33 | 113.7 | 4.1e-36 | 1.5e-32 | 112.4 |
| pfu_aug2.0_370.1_00660.t1 | 3 | 1 | Arrestin_C | 7 | 130 | 2.1e-17 | 63.5 | 2.8e-09 | 1.0e-05 | 25.6 |
| pfu_aug2.0_370.1_00660.t1 | 3 | 2 | Arrestin_C | 174 | 206 | 2.1e-17 | 63.5 | 1.8e-05 | 0.068 | 13.2 |
| pfu_aug2.0_370.1_00660.t1 | 3 | 3 | Arrestin_C | 222 | 276 | 2.1e-17 | 63.5 | 9.6e-08 | 0.00036 | 20.6 |
| pfu_aug2.0_370.1_00660.t1 | 2 | 2 | Arrestin_N | 234 | 256 | 6.0e-33 | 113.7 | 2.5 | 9100.0 | -3.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_370.1_00660.t1 | gi|392891707|ref|NP_001254291.1| | ARRD-6, isoform a [Caenorhabditis elegans] | 0.0 |
| pfu_aug2.0_370.1_00660.t1 | gi|392891705|ref|NP_001254290.1| | ARRD-6, isoform b [Caenorhabditis elegans] | 0.0 |
| pfu_aug2.0_370.1_00660.t1 | gi|268532082|ref|XP_002631169.1| | Hypothetical protein CBG02955 [Caenorhabditis briggsae] | 0.0 |
| pfu_aug2.0_370.1_00660.t1 | gi|308509918|ref|XP_003117142.1| | hypothetical protein CRE_02161 [Caenorhabditis remanei] | 0.0 |
| pfu_aug2.0_370.1_00660.t1 | gi|91087897|ref|XP_970459.1| | PREDICTED: arrestin domain-containing protein 3 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_370.1_00660.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_370.1_00660.t1 atggattccgtaacaaggtttgagctggaactggataaggatgtctattatgccggagagaccttatcaggacgagtggt tgttagtaatacagagaatatcaaagttcaaggtatacgcctgttgttgcgagggaaagctcacgtggaatggaagatta acaaagctggagacagaaggatcgtcaaagatgatgagtactatatagatgaaaagaagatcgtttggggaaaagacaaa aatgacgccgatggtggaatacccatactgccccgcgggaaccacaagtacaaattccagtttaaactacccgagagtgc tctgccttgctcgtttgagagtaagatcggtactattcggtactatatccgaacgaccatggacatcccgtactcctcct ccccacaggggaagaaatacttcacgatcataggtcctcacatagactgtatggacgaacggtttctgagtccgacaaga gcaacagacaaaagatactcttgttgtttctgttgcacaaaagggccggtaactctggaggcggtccttgagcgtagtgc gtattgctgtggggagaacattcgtctgagatcccaagtacagaatggtagtgatcagcaatatcagggtgataatgtcc ccgcccaccacacagagaaaatagacaatcttcagcagtacctacaggtgcccgtcatgccacccaccttgtccacggac gtatgcagtgttatacagatatactacactcttaaggtgtgcctttcgatggagaagtctggagacgcattagaattaca gtttcctttaaccattgccacgacaccttttagaattccaaatgcaccatatccgatacttcagtatgatgcagcagtgt gttacgtagaaggagggatgtacgtgagttcagagttccagcttggccaagtttatatgggagatgaagaagacacggat gacattatcctctatagacctgtatatgtctgtgtcccccatgaaagactgcaggtcacaaacgttgcgaaagaaggcct cgtgagtcgtgctggctccagactatcaatgacaaggcttaatgataagcttaaattcaaagaaccgaaagtagaacttt ccgctttcgactcgcctgcagactctccgcaagtattgcacaaagatgtctcgcctgttttccccaccaattctaaagac tcattatcacctttgttttctcatgtaagtttgtctgagcagacggacggtcaaatgaggtatacctcacatgaagcaaa cgaagtcattgaagaagcagacgaagaaacggaagaagtgtccgttgaggttatttcagtgcaaaaagaagattcgattg aggtgaaggaaataagttcttcaccaagaggaagtccatgtgctgaaaaggacgataagatatga |
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Protein
| Protein ID | pfu_aug2.0_370.1_00660.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_370.1_00660.t1 MDSVTRFELELDKDVYYAGETLSGRVVVSNTENIKVQGIRLLLRGKAHVEWKINKAGDRRIVKDDEYYIDEKKIVWGKDK NDADGGIPILPRGNHKYKFQFKLPESALPCSFESKIGTIRYYIRTTMDIPYSSSPQGKKYFTIIGPHIDCMDERFLSPTR ATDKRYSCCFCCTKGPVTLEAVLERSAYCCGENIRLRSQVQNGSDQQYQGDNVPAHHTEKIDNLQQYLQVPVMPPTLSTD VCSVIQIYYTLKVCLSMEKSGDALELQFPLTIATTPFRIPNAPYPILQYDAAVCYVEGGMYVSSEFQLGQVYMGDEEDTD DIILYRPVYVCVPHERLQVTNVAKEGLVSRAGSRLSMTRLNDKLKFKEPKVELSAFDSPADSPQVLHKDVSPVFPTNSKD SLSPLFSHVSLSEQTDGQMRYTSHEANEVIEEADEETEEVSVEVISVQKEDSIEVKEISSSPRGSPCAEKDDKI |
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