Gene
| Gene Model ID | pfu_aug2.0_370.1_00661 |
|---|---|
| Locus | scaffold370.1 : 68266 ... 73716 : + |
| To GenomeBrowser | scaffold370.1:68266..73716 |
| Genes list of scaffold | scaffold370.1 |
| Synonym | pfu_aug1.0_405.1_07519 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_370.1_00661.t1 | 1 | 1 | SH3_2 | 7 | 76 | 1.6e-06 | 27.4 | 4.2e-10 | 2.1e-06 | 27.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_370.1_00661.t1 | gi|585648312|ref|XP_006814196.1| | PREDICTED: G2/M phase-specific E3 ubiquitin-protein ligase-like [Saccoglossus kowalevskii] | 3.0e-06 |
| pfu_aug2.0_370.1_00661.t1 | gi|260823974|ref|XP_002606943.1| | hypothetical protein BRAFLDRAFT_91712 [Branchiostoma floridae] | 1.0e-05 |
| pfu_aug2.0_370.1_00661.t1 | gi|432906507|ref|XP_004077564.1| | PREDICTED: vinexin-like isoform X2 [Oryzias latipes] | 1.0e-05 |
Transcript
| Transcript ID | pfu_aug2.0_370.1_00661.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_370.1_00661.t1 atggagggcagcaagttttattacaaagcccgttataagtatgtaccagagaatgatggtgaggacgactcggacatacc agatattcctatggaggtaggggatttattagaggtctccgcccctctggaggaccctaatgaaaacccagagaaccccc agggatggctgaaaggctacaacaaaactcagaaggtgtatggatacttccctgggaaccatgtagaagctgtcaaaatg gaggagatactaccacaatcacaaccaggaactgctatgctatgcggagaaagaattagatcgtcacagttttag |
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Protein
| Protein ID | pfu_aug2.0_370.1_00661.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_370.1_00661.t1 MEGSKFYYKARYKYVPENDGEDDSDIPDIPMEVGDLLEVSAPLEDPNENPENPQGWLKGYNKTQKVYGYFPGNHVEAVKM EEILPQSQPGTAMLCGERIRSSQF |
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