Gene
| Gene Model ID | pfu_aug2.0_370.1_00663 |
|---|---|
| Locus | scaffold370.1 : 157343 ... 172695 : - |
| To GenomeBrowser | scaffold370.1:157343..172695 |
| Genes list of scaffold | scaffold370.1 |
| Synonym | pfu_aug1.0_11315.1_68316 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| udp-glucose 4-epimerase | GO:0003978 GO:0006012 GO:0050662 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_370.1_00663.t1 | 2 | 1 | adh_short | 4 | 134 | 6.8e-08 | 32.5 | 1.2e-09 | 1.3e-06 | 28.4 |
| pfu_aug2.0_370.1_00663.t1 | 2 | 1 | Epimerase | 6 | 221 | 0.0 | 249.5 | 2.40042e-42 | 2.6e-39 | 135.0 |
| pfu_aug2.0_370.1_00663.t1 | 2 | 1 | Polysacc_synt_2 | 6 | 182 | 5.0e-17 | 61.7 | 4.2e-13 | 4.4e-10 | 38.9 |
| pfu_aug2.0_370.1_00663.t1 | 2 | 1 | RmlD_sub_bind | 6 | 169 | 2.4e-15 | 56.2 | 1.8e-12 | 1.9e-09 | 36.8 |
| pfu_aug2.0_370.1_00663.t1 | 2 | 1 | NAD_binding_10 | 6 | 198 | 2.5e-15 | 56.9 | 1.7e-11 | 1.8e-08 | 34.6 |
| pfu_aug2.0_370.1_00663.t1 | 2 | 1 | 3Beta_HSD | 7 | 161 | 2.0e-18 | 66.0 | 7.5e-15 | 8.0e-12 | 44.4 |
| pfu_aug2.0_370.1_00663.t1 | 2 | 1 | NAD_binding_4 | 8 | 194 | 1.1e-19 | 70.3 | 9.7e-11 | 1.0e-07 | 31.1 |
| pfu_aug2.0_370.1_00663.t1 | 2 | 2 | RmlD_sub_bind | 223 | 342 | 2.4e-15 | 56.2 | 1.7e-06 | 0.0018 | 17.2 |
| pfu_aug2.0_370.1_00663.t1 | 2 | 2 | Epimerase | 225 | 417 | 0.0 | 249.5 | 1.1e-35 | 1.2e-32 | 113.2 |
| pfu_aug2.0_370.1_00663.t1 | 2 | 2 | 3Beta_HSD | 226 | 324 | 2.0e-18 | 66.0 | 3.6e-07 | 0.00038 | 19.2 |
| pfu_aug2.0_370.1_00663.t1 | 2 | 2 | NAD_binding_10 | 226 | 361 | 2.5e-15 | 56.9 | 5.8e-07 | 0.00062 | 19.8 |
| pfu_aug2.0_370.1_00663.t1 | 2 | 2 | Polysacc_synt_2 | 229 | 345 | 5.0e-17 | 61.7 | 3.7e-06 | 0.0039 | 16.1 |
| pfu_aug2.0_370.1_00663.t1 | 2 | 2 | NAD_binding_4 | 231 | 357 | 1.1e-19 | 70.3 | 3.0e-11 | 3.2e-08 | 32.7 |
| pfu_aug2.0_370.1_00663.t1 | 2 | 2 | adh_short | 263 | 297 | 6.8e-08 | 32.5 | 0.22 | 240.0 | 1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_370.1_00663.t1 | gi|676481706|ref|XP_009062466.1| | hypothetical protein LOTGIDRAFT_128420 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_370.1_00663.t1 | gi|524866589|ref|XP_005090115.1| | PREDICTED: UDP-glucose 4-epimerase-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_370.1_00663.t1 | gi|514684189|ref|XP_004989675.1| | UDP-glucose 4-epimerase [Salpingoeca rosetta] | 0.0 |
| pfu_aug2.0_370.1_00663.t1 | gi|167519547|ref|XP_001744113.1| | hypothetical protein [Monosiga brevicollis MX1] | 0.0 |
| pfu_aug2.0_370.1_00663.t1 | gi|156408682|ref|XP_001641985.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_370.1_00663.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_370.1_00663.t1 atgagtaaagggagtatactcctgacaggaggggcagggtttgtaggcagccatactgtgatagagtttatccaagcagg atattctgttgtagtcttggacaaccttgtcaatgcaagcatggagagcataaaacgagttgagaaaataacaggtaaag aaattccagccgtcaatgtggatttactgaacaaagaggcattaacagatttattttctaaacacaagtttactagcgta gttcactttgctggcctgaaggctgtcggagaatcttgtcagttacccctcctgtactaccatactaatataggagcaac catcaatctgttagaggtgatgaaatcttttgatgtgaagaatatgattttctcaagttccgccacggtatacggtactc cgcagtatttacctatagacgaaaaacatcctgttggtggttgtaccaacccatacggcaaaacaaaatatttcattgaa gaaatcctcagagacctagccaaggcagaacctgactggaacattgttatacttcgttactttaatcctgtcggggccca tgagtctggtcaaataggtgaggatccacagggtgtgcccaataatcttatgccatttatctcacaagtagccgtaggta aaaggaaggaattgaacgtttacggtgatgattacgacacacctgatggtacagatcttcaagagataatccacaagttt actagcgtagttcactttgctggcctgaaggctgtcggagaatcttgtcagttacccctcctgtactaccatactaatat aggagcaaccatcaatctgttagaggtgatgaaatcttttgatgtgaagaatatgattttctcaagttccgccacggtat acggtactccgcagtatttacctatagacgaaaaacatcctgttggtggttgtaccaacccatacggcaaaacaaaatat ttcattgaagaaatcctcagagacctagccaaggcagaacctgactggaacattgttatacttcgttactttaatcctgt cggggcccatgagtctggtcaaataggtgaggatccacagggtgtgcccaataatcttatgccatttatctcacaagtag ccgtaggtaaaaggaaggaattgaacgtttacggtgatgattacgacacacctgatggtacaggagtaagagactatata catgtggttgatttagctaaaggtcacgtggcagctcagacaaaaatagaaactaaatgtggatgtaagatcgcaacaaa cactggacatcaagtggtacaattacaatggaaccaggtcaataaacactggacatcaagtggaacaataacactggaac caagtcaacaaacactggacattacgtggaacaattacaatgaaaccaagttaataaacactggacatcaagtggaacaa ttacactggaaccaagtcaataaacactggacattacgtggaacatttacaatggaaccaagtcagcaaacactggacat caagtggtacaattacaatggaaccaagtcaacaaacactggacatcacgtggaatag |
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Protein
| Protein ID | pfu_aug2.0_370.1_00663.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_370.1_00663.t1 MSKGSILLTGGAGFVGSHTVIEFIQAGYSVVVLDNLVNASMESIKRVEKITGKEIPAVNVDLLNKEALTDLFSKHKFTSV VHFAGLKAVGESCQLPLLYYHTNIGATINLLEVMKSFDVKNMIFSSSATVYGTPQYLPIDEKHPVGGCTNPYGKTKYFIE EILRDLAKAEPDWNIVILRYFNPVGAHESGQIGEDPQGVPNNLMPFISQVAVGKRKELNVYGDDYDTPDGTDLQEIIHKF TSVVHFAGLKAVGESCQLPLLYYHTNIGATINLLEVMKSFDVKNMIFSSSATVYGTPQYLPIDEKHPVGGCTNPYGKTKY FIEEILRDLAKAEPDWNIVILRYFNPVGAHESGQIGEDPQGVPNNLMPFISQVAVGKRKELNVYGDDYDTPDGTGVRDYI HVVDLAKGHVAAQTKIETKCGCKIATNTGHQVVQLQWNQVNKHWTSSGTITLEPSQQTLDITWNNYNETKLINTGHQVEQ LHWNQVNKHWTLRGTFTMEPSQQTLDIKWYNYNGTKSTNTGHHVE |
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