Gene
| Gene Model ID | pfu_aug2.0_370.1_00665 |
|---|---|
| Locus | scaffold370.1 : 222673 ... 228315 : - |
| To GenomeBrowser | scaffold370.1:222673..228315 |
| Genes list of scaffold | scaffold370.1 |
| Synonym | pfu_aug1.0_65041.1_49006 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_370.1_00665.t1 | 2 | 1 | DUF2668 | 47 | 183 | 1.0e-08 | 35.5 | 2.7e-12 | 1.0e-08 | 35.5 |
| pfu_aug2.0_370.1_00665.t1 | 2 | 2 | DUF2668 | 154 | 186 | 1.0e-08 | 35.5 | 1.1 | 4200.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_370.1_00665.t1 | gi|507541210|ref|XP_004654607.1| | 9.0e-09 | |
| pfu_aug2.0_370.1_00665.t1 | gi|507928241|ref|XP_004675375.1| | 1.0e-08 | |
| pfu_aug2.0_370.1_00665.t1 | gi|548449300|ref|XP_005674812.1| | PREDICTED: cysteine and tyrosine-rich protein 1 [Capra hircus] | 3.0e-08 |
| pfu_aug2.0_370.1_00665.t1 | gi|426217211|ref|XP_004002847.1| | 4.0e-08 | |
| pfu_aug2.0_370.1_00665.t1 | gi|532002168|ref|XP_005345354.1| | PREDICTED: cysteine and tyrosine-rich protein 1 [Microtus ochrogaster] | 5.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_370.1_00665.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_370.1_00665.t1 atggcgctgactgttatactgatttgttacatctttcttcttgttgcagagtgtgtgttgggtcagggatataccaccac ccaacatccctgtatctacgaaagttacagctacatatacaatgcgtactctctgaagtataaatattgttcatcatacc aatattgctgtggtacctacacgtacagatactgctgttacgactacacaaactattacagttcctacgtctatagttac atctctcatactatctcagcagcagccatcgctgggatagtgattggcgtactgtttgctgctgccatcattataagcat tatagtatgtatatgctgtgcggtacgcaagagaccagctcgtggaggagttgtgtaccaaaacaatacaccagccgtag cggtagtccatagtcaggcacaaccaggagtagcctaccctactcaaccttacgtggtgtcccctcaaaattatccttac ccacctccacctgcccaaccttatcaaccgccggtaggtgtcgctacttctcatccaccgccataccagccacaaggggg cgtgacaaatacagcgtatactgccgaccatggctcagccccagacaacaaagcatccgctcccccagcatatgtaccac caacacaacagtacgagaccatatcaaaccagaggagggatgacaacgtatatgacgagctacaataa |
|
Protein
| Protein ID | pfu_aug2.0_370.1_00665.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_370.1_00665.t1 MALTVILICYIFLLVAECVLGQGYTTTQHPCIYESYSYIYNAYSLKYKYCSSYQYCCGTYTYRYCCYDYTNYYSSYVYSY ISHTISAAAIAGIVIGVLFAAAIIISIIVCICCAVRKRPARGGVVYQNNTPAVAVVHSQAQPGVAYPTQPYVVSPQNYPY PPPPAQPYQPPVGVATSHPPPYQPQGGVTNTAYTADHGSAPDNKASAPPAYVPPTQQYETISNQRRDDNVYDELQ |
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