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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_371.1_04065
Locus scaffold371.1 : 16766 ... 45796 : +
To GenomeBrowser scaffold371.1:16766..45796
Genes list of scaffold scaffold371.1
Synonym pfu_aug1.0_438.1_07536

Manual annotation
Annotation by Blast2GO
Annotation GO
synapsin isoform GO:0003824 GO:0005524 GO:0007269 GO:0008021 GO:0008152

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_371.1_04065.t1 gi|676426783|ref|XP_009044734.1| hypothetical protein LOTGIDRAFT_135981, partial [Lottia gigantea] 1.0e-18
pfu_aug2.0_371.1_04065.t1 gi|325197118|ref|NP_001191412.1| synapsin isoform 2.1 [Aplysia californica] 3.0e-16
pfu_aug2.0_371.1_04065.t1 gi|15077061|gb|AAK83049.1|AF287984_1 synapsin isoform 7.1 [Aplysia californica] 3.0e-16
pfu_aug2.0_371.1_04065.t1 gi|15077057|gb|AAK83047.1|AF287982_1 synapsin isoform 11.1 [Aplysia californica] 3.0e-16
pfu_aug2.0_371.1_04065.t1 gi|15077059|gb|AAK83048.1|AF287983_1 synapsin isoform 2.1 [Aplysia californica] 4.0e-16

Transcript
Transcript IDpfu_aug2.0_371.1_04065.t1
Definition-
>pfu_aug2.0_371.1_04065.t1
atgaatttcttgcgtcgaaggttcagctcgggggacttacagggggagcttaaagatgaaaacagcagcatactaacatt
caaaaagggcccgtcccccagtgctcctagctccccttccaagtccaattctacggcgtctctgtccaaaggaactgctg
ctaacaaacctgcctataacaaagaccgatgcaaaactttactggtgatagacgaccagcacacagactgttaa

Protein
Protein IDpfu_aug2.0_371.1_04065.t1
Definition-
>pfu_aug2.0_371.1_04065.t1
MNFLRRRFSSGDLQGELKDENSSILTFKKGPSPSAPSSPSKSNSTASLSKGTAANKPAYNKDRCKTLLVIDDQHTDC

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