Gene
| Gene Model ID | pfu_aug2.0_371.1_04069 |
|---|---|
| Locus | scaffold371.1 : 109926 ... 112744 : + |
| To GenomeBrowser | scaffold371.1:109926..112744 |
| Genes list of scaffold | scaffold371.1 |
| Synonym | pfu_aug1.0_438.1_07541 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mitochondrial substrate carrier family protein ucpb-like | GO:0016021 GO:0044765 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_371.1_04069.t1 | 3 | 1 | Mito_carr | 18 | 69 | 0.0 | 196.9 | 2.0e-13 | 2.9e-09 | 36.5 |
| pfu_aug2.0_371.1_04069.t1 | 3 | 2 | Mito_carr | 77 | 170 | 0.0 | 196.9 | 2.5e-25 | 3.7e-21 | 74.6 |
| pfu_aug2.0_371.1_04069.t1 | 3 | 3 | Mito_carr | 181 | 265 | 0.0 | 196.9 | 4.3e-28 | 6.4e-24 | 83.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_371.1_04069.t1 | gi|676423913|ref|XP_009044161.1| | hypothetical protein LOTGIDRAFT_208602 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_371.1_04069.t1 | gi|291242486|ref|XP_002741139.1| | PREDICTED: mitochondrial substrate carrier family protein ucpB-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_371.1_04069.t1 | gi|585710369|ref|XP_006824534.1| | PREDICTED: mitochondrial substrate carrier family protein ucpB-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_371.1_04069.t1 | gi|676423924|ref|XP_009044162.1| | hypothetical protein LOTGIDRAFT_152473 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_371.1_04069.t1 | gi|390341769|ref|XP_785934.3| | PREDICTED: mitochondrial substrate carrier family protein ucpB [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_371.1_04069.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_371.1_04069.t1 atgcagcttgaaaatgaactggtgaagcaaaaaggacttgatgtaataaggaatagatactacgacggcttcctgaaagg gggactgcagatagtccgtgatgagggtgtcctgggactttacaaaggactgctaccgtctctgatgagggagggaagtt acagtactataagaatgggggcctacgaaccccttaaagtcttgtttggggcaacagatccagctcacacacctttatgg aagaaaatatgtgcaggtgccatttcaggtacaattggaagctcaatagcaactcccacagatttagtaaaagtccgtat gcaggctcaagggaaactagtagagggtcaagttcctcggtatagaagcacttttgctgctttctcggagatattttaca ccgagggcatccgtggtctgtacgtcggcattggacctactgttaaacgagcagcggtactcactgcaactcagattcca agctacgaccatgctaaacacacaatactgaacgctgggttgatgtcagagggaccaagacttcacgtggtgtgctctat gattgctgggttcatgactgcactaactacctctcctgttgacgtcatcaaaactagaataatgaaccagcaacgtgatc atacaaaagtatatagaaatgcgtttgactgcttctggaagactatacgatcggagggatttttaggactttacaaagga tttttccccaactggatgagaattggtccacatacaatcgtcactttctttatatttgaacaactaagacgggtcgttgg catagccccgatataa |
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Protein
| Protein ID | pfu_aug2.0_371.1_04069.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_371.1_04069.t1 MQLENELVKQKGLDVIRNRYYDGFLKGGLQIVRDEGVLGLYKGLLPSLMREGSYSTIRMGAYEPLKVLFGATDPAHTPLW KKICAGAISGTIGSSIATPTDLVKVRMQAQGKLVEGQVPRYRSTFAAFSEIFYTEGIRGLYVGIGPTVKRAAVLTATQIP SYDHAKHTILNAGLMSEGPRLHVVCSMIAGFMTALTTSPVDVIKTRIMNQQRDHTKVYRNAFDCFWKTIRSEGFLGLYKG FFPNWMRIGPHTIVTFFIFEQLRRVVGIAPI |
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