Gene
| Gene Model ID | pfu_aug2.0_3711.1_05880 |
|---|---|
| Locus | scaffold3711.1 : 45586 ... 48224 : + |
| To GenomeBrowser | scaffold3711.1:45586..48224 |
| Genes list of scaffold | scaffold3711.1 |
| Synonym | pfu_aug1.0_12160.1_39292 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3711.1_05880.t1 | 1 | 1 | C1q | 62 | 184 | 2.9e-23 | 82.2 | 5.3e-27 | 4.0e-23 | 81.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3711.1_05880.t1 | gi|742247922|ref|XP_010865649.1| | PREDICTED: complement C1q-like protein 2 isoform X1 [Esox lucius] | 1.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_3711.1_05880.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3711.1_05880.t1 atggctggctatcatcagggtagaatacatgaaaaattggatagactcctcagaaagcatcaaaatctagcccttcatca aagactactttcccgactggaggatttagagaaaatggtaaagaaacacaagaatgaatctgacagacgattcctcgaaa agaacgatgccaacacaattatagcattcactgtatcgtcatctacgtccttgtctgattacacgaacaagaagatcatc tacgataaggtcatcacaaccatcgggaatggatacaacaaaactacaggtatatttacctgtcctgtgccaggtacata tgtctttacctggtccactatgtctagaactgcagtacaacgatgtgttgcatacatctacctaaatggtggtccgatgt ttatgacttacagtgttgaaagtaacaatgggtaccacgaagtagccagtaataccatggtgctctcattgaagatgaat gaccacgtgttgatcgggacaacgacgggaaaatattgctatggatatccgtacactggattctctggatggaaattata a |
|
Protein
| Protein ID | pfu_aug2.0_3711.1_05880.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3711.1_05880.t1 MAGYHQGRIHEKLDRLLRKHQNLALHQRLLSRLEDLEKMVKKHKNESDRRFLEKNDANTIIAFTVSSSTSLSDYTNKKII YDKVITTIGNGYNKTTGIFTCPVPGTYVFTWSTMSRTAVQRCVAYIYLNGGPMFMTYSVESNNGYHEVASNTMVLSLKMN DHVLIGTTTGKYCYGYPYTGFSGWKL |
|