Gene
| Gene Model ID | pfu_aug2.0_3714.1_15843 |
|---|---|
| Locus | scaffold3714.1 : 4431 ... 21175 : - |
| To GenomeBrowser | scaffold3714.1:4431..21175 |
| Genes list of scaffold | scaffold3714.1 |
| Synonym | pfu_aug1.0_7231.1_45609 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3714.1_15843.t1 | 2 | 1 | Lectin_C | 28 | 138 | 1.7e-21 | 76.8 | 1.1e-16 | 8.0e-13 | 48.9 |
| pfu_aug2.0_3714.1_15843.t1 | 2 | 2 | Lectin_C | 215 | 316 | 1.7e-21 | 76.8 | 3.7e-11 | 2.7e-07 | 31.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3714.1_15843.t1 | gi|459184363|ref|XP_002123456.2| | PREDICTED: uncharacterized protein LOC100186027 [Ciona intestinalis] | 1.0e-10 |
| pfu_aug2.0_3714.1_15843.t1 | gi|308460593|ref|XP_003092599.1| | hypothetical protein CRE_19503 [Caenorhabditis remanei] | 4.0e-10 |
| pfu_aug2.0_3714.1_15843.t1 | gi|548335633|ref|XP_005720588.1| | PREDICTED: macrophage mannose receptor 1-like [Pundamilia nyererei] | 1.0e-09 |
| pfu_aug2.0_3714.1_15843.t1 | gi|583987972|ref|XP_006789212.1| | PREDICTED: macrophage mannose receptor 1-like [Neolamprologus brichardi] | 2.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_3714.1_15843.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3714.1_15843.t1 atgcgtttgaagaaacgaccaaccgaaagtcagttgtccacgggggcaagcgcggacgggagatttacattccactccac tcagaagacattccaagaagctgaggcggcatgtcaagcacaaggtcaacacttagtgaagattgacagtgccgacaaat ataaagaagtcaaagattttggatcaaaccctgacggttcttcatattcaggggtatggatcggtcttcgacgggacgat tcccagcaacaaggagccacgttccgatacacagatggtaccacggcaagttactttgaatgggagtcaggtgaacccaa tagatttgaccttgaagcttgtataagattaaatacggaccatctcctgatgcgcaccactggatgtgattccgaccatg agtttatctgtgagaacgtctcaaactctaatgttacagcaccagtttggaggcagctgatacggacttatccccagtta gaactgtcttcgagttctggtgatctcagaatttcaacaatggcgtacctgtggcatatttctttatttttgctgtcagt ctacattcactctgtagaaagttgtgttgtagcaagtgaatgtgaggcaaatgctggagccaattcttgttcatcaaatg ggactagtcattgggcatgtatcagcaaactgtgtgaatgcaggtctcatgataatcataataagggtaatatcattttc tcacgtaggagatccttatctgattgttggattggattgaaggaggacgaaacccagatatcaagacatatatatcgatt ccaagacggggagatctccaccttcttccaatggttctctggcgagcctaatagtcagagcagtgatttctgtgtcagac ttgataaagacaacaagagaatgagaaccactacatgtcgagatcgccgtccatttgtctgtgaaaaggttcaagaaata ggttgcacggcaaagacagactgcaagtataaatgtgctactgtacctgaataccattgtattgaccacaaatgtagctg tgctcctttaggctga |
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Protein
| Protein ID | pfu_aug2.0_3714.1_15843.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3714.1_15843.t1 MRLKKRPTESQLSTGASADGRFTFHSTQKTFQEAEAACQAQGQHLVKIDSADKYKEVKDFGSNPDGSSYSGVWIGLRRDD SQQQGATFRYTDGTTASYFEWESGEPNRFDLEACIRLNTDHLLMRTTGCDSDHEFICENVSNSNVTAPVWRQLIRTYPQL ELSSSSGDLRISTMAYLWHISLFLLSVYIHSVESCVVASECEANAGANSCSSNGTSHWACISKLCECRSHDNHNKGNIIF SRRRSLSDCWIGLKEDETQISRHIYRFQDGEISTFFQWFSGEPNSQSSDFCVRLDKDNKRMRTTTCRDRRPFVCEKVQEI GCTAKTDCKYKCATVPEYHCIDHKCSCAPLG |
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