Gene
| Gene Model ID | pfu_aug2.0_3717.1_25827 |
|---|---|
| Locus | scaffold3717.1 : 11574 ... 27095 : - |
| To GenomeBrowser | scaffold3717.1:11574..27095 |
| Genes list of scaffold | scaffold3717.1 |
| Synonym | pfu_aug1.0_945.1_07766 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3717.1_25827.t1 | 2 | 1 | Lectin_C | 60 | 130 | 3.1e-13 | 50.2 | 1.6e-13 | 2.4e-09 | 37.7 |
| pfu_aug2.0_3717.1_25827.t1 | 2 | 2 | Lectin_C | 170 | 192 | 3.1e-13 | 50.2 | 6.2e-05 | 0.93 | 10.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3717.1_25827.t1 | gi|524872182|ref|XP_005092855.1| | PREDICTED: macrophage mannose receptor 1-like [Aplysia californica] | 3.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_3717.1_25827.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3717.1_25827.t1 atgacttccaataggtcaatagctgacgaaactcgacttctcatcttaaaggaattctacgaaactttcctagaatcaat tgcagacgacagggacggatgtcccacaaatctctcacgtgaccaatacctcaaagtgcatggtgggaaatgttacgaat tcgctgtgcaccgtcatctgtcgtggccaaaagcagaaagcgattgtagaacaaggggaggtcaccttgtgaaggtagaa gatctcgctgaagaagagtttattatgggaaatcttcgatcttacaacttcaggggccaaggggtgtggattggactgac tagaccccgagatggagcatcgtttacatgggtcacaggagagccaatggattttcaatattgggcgccgggacagcccg gaagcggaagtggaggcaggcgacgtcggcttcttcttgatggcattcatctaccaaccggctttccttcgctacatcta ccttctttacatctaccaaagttatttcatgaggattgtgttcttctgaagtacaccgactctggccgctggcacgacta tccatgtgaacagctagatcttgtaggactcgttccggagaattacccgtatgtttgcgaatatcctcacatgaatgtga atacgaaccttccaaaccccattacagcaaggccgataactccagcaagaaccaccactaccacacctgctcctggcact gattttcccatcacaaccaccacgtctgcctctggcactgattttccaccatcaccaaccactcaagctccaaaaactac cactactaccacggagacaactgccaagatcacagacgcaacgactacagcagcaactagtaaaacaacggcgtccccaa catcagttgtagttattggatga |
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Protein
| Protein ID | pfu_aug2.0_3717.1_25827.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3717.1_25827.t1 MTSNRSIADETRLLILKEFYETFLESIADDRDGCPTNLSRDQYLKVHGGKCYEFAVHRHLSWPKAESDCRTRGGHLVKVE DLAEEEFIMGNLRSYNFRGQGVWIGLTRPRDGASFTWVTGEPMDFQYWAPGQPGSGSGGRRRRLLLDGIHLPTGFPSLHL PSLHLPKLFHEDCVLLKYTDSGRWHDYPCEQLDLVGLVPENYPYVCEYPHMNVNTNLPNPITARPITPARTTTTTPAPGT DFPITTTTSASGTDFPPSPTTQAPKTTTTTTETTAKITDATTTAATSKTTASPTSVVVIG |
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