Gene
| Gene Model ID | pfu_aug2.0_374.1_14059 |
|---|---|
| Locus | scaffold374.1 : 1946 ... 8467 : + |
| To GenomeBrowser | scaffold374.1:1946..8467 |
| Genes list of scaffold | scaffold374.1 |
| Synonym | pfu_aug1.0_34733.1_40948 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_374.1_14059.t1 | 1 | 1 | GST_C_3 | 177 | 266 | 5.0e-13 | 49.3 | 3.0e-16 | 7.3e-13 | 48.8 |
| pfu_aug2.0_374.1_14059.t1 | 1 | 1 | GST_C_2 | 196 | 264 | 1.1e-08 | 34.8 | 8.7e-12 | 2.2e-08 | 33.8 |
| pfu_aug2.0_374.1_14059.t1 | 1 | 1 | GST_C | 198 | 266 | 3.3e-06 | 26.9 | 2.5e-09 | 6.1e-06 | 26.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_374.1_14059.t1 | gi|260807852|ref|XP_002598722.1| | hypothetical protein BRAFLDRAFT_127752 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_374.1_14059.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_374.1_14059.t1 atggagtcggcaatgactaccgtctgtgactttataagcaaagtgccattctatgttaaagcctcagttggcgctgcagt tgcagggattgtggtacttgtagtacacagaaaacttaaaacaaaaaagagggatatacctcgggacacaatcatcttac atcagccatggtacggaccctatcagatggtaccattcgctctcaaagtagagacctatctgagaatcatgaaaattccg tataagctcgacatcagcagtaaaaagggtcctaacagaaagcatccgtggatcgagtacaatgatcaggtcatcccaga ttcttccttcatcatcaaattcgtaaacaaaacgttcaacgtggacttggacaaaggacttaatccggaacagctagcag tcgctcatggattccgaaaaatgttggaagagaacacatattgggctattataatgaatagatactattttgactctact gcattcaagaaagttgggcttccgtggatattgagtccatttattccgtatttcaaacgtactctcctaaaaatggcata caaccatggtattggacggcactctcatgaggaaattaatgaaataatgaaggaggacttgaatgctgtttccaaatttc taggaaagaaaaggttccttcttggagataagccatgtcaggcggattgtgcagtgtttggacagcttgctcagtgttat tggcacagttttggaaacataagcgagaaaactatcaaagaatttcctaatctatgtgagtactgtgataggatggtgac attatactggccggactgggagggacttaaatcaaaacacggatacatcggcttataa |
|
Protein
| Protein ID | pfu_aug2.0_374.1_14059.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_374.1_14059.t1 MESAMTTVCDFISKVPFYVKASVGAAVAGIVVLVVHRKLKTKKRDIPRDTIILHQPWYGPYQMVPFALKVETYLRIMKIP YKLDISSKKGPNRKHPWIEYNDQVIPDSSFIIKFVNKTFNVDLDKGLNPEQLAVAHGFRKMLEENTYWAIIMNRYYFDST AFKKVGLPWILSPFIPYFKRTLLKMAYNHGIGRHSHEEINEIMKEDLNAVSKFLGKKRFLLGDKPCQADCAVFGQLAQCY WHSFGNISEKTIKEFPNLCEYCDRMVTLYWPDWEGLKSKHGYIGL |
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