Gene
| Gene Model ID | pfu_aug2.0_374.1_14064 |
|---|---|
| Locus | scaffold374.1 : 77826 ... 114741 : + |
| To GenomeBrowser | scaffold374.1:77826..114741 |
| Genes list of scaffold | scaffold374.1 |
| Synonym | pfu_aug1.0_3178.1_51914 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| e3 ubiquitin-protein ligase partial | GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_374.1_14064.t1 | 1 | 1 | C2 | 180 | 271 | 1.3e-08 | 34.5 | 7.7e-12 | 3.8e-08 | 33.0 |
| pfu_aug2.0_374.1_14064.t1 | 2 | 1 | WW | 984 | 1013 | 1.1e-16 | 60.3 | 4.2e-14 | 2.1e-10 | 40.2 |
| pfu_aug2.0_374.1_14064.t1 | 2 | 2 | WW | 1165 | 1194 | 1.1e-16 | 60.3 | 6.1e-07 | 0.003 | 17.3 |
| pfu_aug2.0_374.1_14064.t1 | 2 | 1 | HECT | 1344 | 1455 | 0.0 | 226.9 | 9.6e-23 | 4.8e-19 | 68.6 |
| pfu_aug2.0_374.1_14064.t1 | 2 | 2 | HECT | 1457 | 1599 | 0.0 | 226.9 | 0.0 | 1.4013e-45 | 156.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_374.1_14064.t1 | gi|593752691|ref|XP_007115278.1| | PREDICTED: E3 ubiquitin-protein ligase HECW2, partial [Physeter catodon] | 0.0 |
| pfu_aug2.0_374.1_14064.t1 | gi|524899386|ref|XP_005106125.1| | PREDICTED: E3 ubiquitin-protein ligase HECW2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_374.1_14064.t1 | gi|395846887|ref|XP_003796121.1| | 0.0 | |
| pfu_aug2.0_374.1_14064.t1 | gi|756140743|ref|NP_001291769.1| | E3 ubiquitin-protein ligase HECW2 isoform 2 [Homo sapiens] | 0.0 |
| pfu_aug2.0_374.1_14064.t1 | gi|51476559|emb|CAH18262.1| | hypothetical protein [Homo sapiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_374.1_14064.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_374.1_14064.t1 atgagtgagtcagcatctggtgtctccttacgtgctgtagatgatttatcgttaccaagtccctctgcatcactaggaac agaaacatttgaattccgacacactcgggagcggagcagtagcgactcagatcttggaagcgaaaactatggaggattgg acgtagatagaacgagtcttacgatcggtaaagatgaaacaataaaagtaagttgggacataaaagaggatgtgaccgct acggactggatagggctttatccctatggcgtcaccgaccctggtgcattctgggatagcaagaacagggggtcaaatgg tgggaaaaagggagagatcacatggcaacttaacgacataagtcactttttaacgcaaggtgaggcaaagatttgcttta agtattacttgggcagcaccaagaaatgtgtggctacaagtccatgtgtactattgaggcagcaggcaaaaaccatgact tcaagtcagatgaacggtgatcatgtggacctatccacagacaggagagtcaaggttaagatcagagacatggaggcatc taaccttaagaagggcatgttcttcaatcctgacccgtacataaagctactgatgcatcctgggagattctgtccacgcc taccccaccacagcaaggagatcaaaacaccgatagtgtataactctacaaatcctaaatggatgggtcagagtttttct atggagtcagttcccactgatgtaatggagtttgagatcaaagataaatttgccaagagtcgccctactatcagtaggtt ccttggaaaggcctccgtcccagtacaaaggattatagaaaaaacggctgaaaggccagcagattttgaccttgagttga ccagaaggacaccttcagacaccgtcagtggatcgttacacttcactgcagatgcaatagatcttataaatgatgggatg gctaggacttccagtagtaacagagtgtctattcaagatgagttaagttctctgacatccaactcggaaactgatttaag agggagtatgcagcaagacgcaagtaccaaggatgacctggaagaccaggaggattctgggatatctttgagtgcagtca tgcgtggaagagtaccagatgaagtggaccatgaatttgcaacaaatgaggaagaaattctgagctgtagtccatcaaat ttagcagcaattcccaatataaagtgtgaatttcattttgattctgacgatgggacggttcaagattcagtggaagattc gcctctgaacatatcccatgattcaccaaagagaactacagtggtgccacctagtgacgaagttctagatgaagaggaga gaaatccacctagtattttaattgatgaatttgatagggaagatgacactatatcttctgctgggaatgaatcattgact ttagaagctgaaagtttagatactacctcattagataatgaagtcagagctgtgatgtctgaaggtgctacagcccctcc aaccctgcccccacgaacttacagggccccgcctttgcctcctcggcagaggacttctagtgctccacccataccccctc gaacccctgacagggctgagaagcctggatttccctccagtggtactgctgttgtgcagattttacctagtcctgacaat agcaaggagtctgaagatcataatgctacaaattctcaacagacacggtcacaagtttcctcaattcaacccaaagagtc tcaaatacctatgcctcaagtccctgcaccccctgtccctgtagcagatccacatatagatagggttaattccttagagc cccctcctcttccccctaggacatacagtcctgtcaatgtcgccaacacgactgcaggagtatgcagtccagataaggaa gaaaaagacaacagcgctacaagctttgatagtatggaaacatatcatgactctgaagaaaatgctatacagccagaaca tgtctcagaattggcaacctctgtgacaagacagtcaagttttggtcgtcctcatcgcgctattgtagccttaccagagg cacgggtgaaaccacgtagaaatcgaagatcaagtcccgatgaagaaattcgtgatttagtgggtaggggtcataatggt cctcagtctgattcaaacaatagtactgtgttctctcagctgtctcagttacaaagtatagagtctgctgttgatcatag ccggacagcaacctctggaagtaggtcactagagtgtagtccacgagtcagtccactttctatgcagtcatctttctcag attctataaccgacagacgatacgccaatctgcaaagtactcctgttcgacctctaagtgatcgtcatagtagatctaat gaaagctgccctgtgcctccgcgaattgtgccaagaaatagaattctcagcgacgaggaaaaacaacaaaatcgtgaaca aattgtacagcaattacagctatggacacaaaaacacaaagacaaaaaccgaggagaatcagacgatgaatcaagatctg tgattagtgatggtagtgtaagtgttagtatcgctaatggagttagtgataggcgaaacagtgacgctagtgtgggagga gctagtgggtcgtcaagtcattcaccacgtactcaggttggcctagtcagacccactgtaaataaaggtgatgtctccaa ggatggtagtgacacgccccctcagatagccactcccagggggcgggacttgtcatcgatggacaggccatcttctaagt ctgtggtatggcaacttcgtcagagtcagtctcgcaacaacagcaatgcaaattcatcacaaaacaaagatggtagtcca tcacctttgcccaagttaccagcaagaaggaggtaccacaaggtagatcccaccccaggggatcagcctctccctccagg ttgggaagcacgtatagacagtcatggaaggatattttacatagatcatataaaccgtaccacaacatggcagaaacctc agatgggacaaaaaacaatgcaacgtaggccaacgattagctcagagcaaaggcagcaactggatagaagataccagagt atacgaagaacaatcaaccagccccgaacagacaatgataatgactcttcatcctcaggaggacaagagagtacccctca gcctgctgtacagccccgccttcctgtccctgcccaccaaccaacccctcccccaactccgcccacatctgacgtcccag acaacagattgccggccgtcaagttcctcacacgctcagatttctttcctcttctacagggtaacgatagggccatggct gagtataacagaaatggtaccttaaaacacatgatcagcaaaataaggagagatcctgttaactttgacagatatcagca taatcgtgatctagtgtctttcctcaaccattttgctgataccaacagagatctacctctaaactgggagatgaaatttg atcgcagtggaaagacatttttcattgaccataatgctcgcttaaccacatttattgaccctcgcttgccagctgatatc ccacctatcaacactgacttcctacacacatctttattgttccgtaaccgaccaaggaccggtaatagtgaaagtcctgt caggaatagccttacgcccactcccccacccagagctcctattgtagaagattcagtacctcaagaaattttatcggaaa aatatgcatcgtacaccaacaacacacgattaaaggagaaggtaaacaaaatacgtacggagggaacggatgccctggac aggatgtgtaacgatatagatctgatacttctattaaggttgatggtaaggagggaccatgtattagaagatgcctttaa taagataatgggacagtccaagagagagctacagaaaagtaaactctacatcacctttgttggagaagaagggttagact atgggggaccatccagggagttctttttcttgctatctcgggagttgtttaatccgtactatggtctgtttgagtactcc gctaacgatacgtataccgtacaaatatctccgatgtctactatagtggaagactttcacgaatggtttcgttttgccgg cagagtcctaggattggcagtggttcatcagtatttactggatgcctttttcacacgacctttctacaaagctttactaa gaataccctggtcattagcagatgttgaagccttagataacgagtttcaccaaagtttactctgggtcaaagataacgat ataacagaattagatatggatctcactttctccgtcaatgaggaggtttttggacaggtgatagatccaaggttgatatc aatgtttgatgcacgagagttggagttggttatagctggtactgtagagatagatgtgaaggactggaggaaacatacag agtatagatcagggtatcacgatcaacatcaggtcatacagtggttctggaacgccatagagaaatttgacaacgagagg agacttaggctgctacagtttgttactggcacttccagtataccttatgaagggtttgcagctcttaggggaagtaatgg acctcgtaaattctgtatcgaaaaatggggtaaagtcaccagtttaccaagggcacacacatgctttaacagactggatc tccctccgtatacaacgtctgacatgttgtttgagaaactcgttacagctgtcgaggaaaccaagatgaaaatgggttta ggttga |
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Protein
| Protein ID | pfu_aug2.0_374.1_14064.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_374.1_14064.t1 MSESASGVSLRAVDDLSLPSPSASLGTETFEFRHTRERSSSDSDLGSENYGGLDVDRTSLTIGKDETIKVSWDIKEDVTA TDWIGLYPYGVTDPGAFWDSKNRGSNGGKKGEITWQLNDISHFLTQGEAKICFKYYLGSTKKCVATSPCVLLRQQAKTMT SSQMNGDHVDLSTDRRVKVKIRDMEASNLKKGMFFNPDPYIKLLMHPGRFCPRLPHHSKEIKTPIVYNSTNPKWMGQSFS MESVPTDVMEFEIKDKFAKSRPTISRFLGKASVPVQRIIEKTAERPADFDLELTRRTPSDTVSGSLHFTADAIDLINDGM ARTSSSNRVSIQDELSSLTSNSETDLRGSMQQDASTKDDLEDQEDSGISLSAVMRGRVPDEVDHEFATNEEEILSCSPSN LAAIPNIKCEFHFDSDDGTVQDSVEDSPLNISHDSPKRTTVVPPSDEVLDEEERNPPSILIDEFDREDDTISSAGNESLT LEAESLDTTSLDNEVRAVMSEGATAPPTLPPRTYRAPPLPPRQRTSSAPPIPPRTPDRAEKPGFPSSGTAVVQILPSPDN SKESEDHNATNSQQTRSQVSSIQPKESQIPMPQVPAPPVPVADPHIDRVNSLEPPPLPPRTYSPVNVANTTAGVCSPDKE EKDNSATSFDSMETYHDSEENAIQPEHVSELATSVTRQSSFGRPHRAIVALPEARVKPRRNRRSSPDEEIRDLVGRGHNG PQSDSNNSTVFSQLSQLQSIESAVDHSRTATSGSRSLECSPRVSPLSMQSSFSDSITDRRYANLQSTPVRPLSDRHSRSN ESCPVPPRIVPRNRILSDEEKQQNREQIVQQLQLWTQKHKDKNRGESDDESRSVISDGSVSVSIANGVSDRRNSDASVGG ASGSSSHSPRTQVGLVRPTVNKGDVSKDGSDTPPQIATPRGRDLSSMDRPSSKSVVWQLRQSQSRNNSNANSSQNKDGSP SPLPKLPARRRYHKVDPTPGDQPLPPGWEARIDSHGRIFYIDHINRTTTWQKPQMGQKTMQRRPTISSEQRQQLDRRYQS IRRTINQPRTDNDNDSSSSGGQESTPQPAVQPRLPVPAHQPTPPPTPPTSDVPDNRLPAVKFLTRSDFFPLLQGNDRAMA EYNRNGTLKHMISKIRRDPVNFDRYQHNRDLVSFLNHFADTNRDLPLNWEMKFDRSGKTFFIDHNARLTTFIDPRLPADI PPINTDFLHTSLLFRNRPRTGNSESPVRNSLTPTPPPRAPIVEDSVPQEILSEKYASYTNNTRLKEKVNKIRTEGTDALD RMCNDIDLILLLRLMVRRDHVLEDAFNKIMGQSKRELQKSKLYITFVGEEGLDYGGPSREFFFLLSRELFNPYYGLFEYS ANDTYTVQISPMSTIVEDFHEWFRFAGRVLGLAVVHQYLLDAFFTRPFYKALLRIPWSLADVEALDNEFHQSLLWVKDND ITELDMDLTFSVNEEVFGQVIDPRLISMFDARELELVIAGTVEIDVKDWRKHTEYRSGYHDQHQVIQWFWNAIEKFDNER RLRLLQFVTGTSSIPYEGFAALRGSNGPRKFCIEKWGKVTSLPRAHTCFNRLDLPPYTTSDMLFEKLVTAVEETKMKMGL G |
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