Gene
| Gene Model ID | pfu_aug2.0_374.1_14066 |
|---|---|
| Locus | scaffold374.1 : 137306 ... 151465 : + |
| To GenomeBrowser | scaffold374.1:137306..151465 |
| Genes list of scaffold | scaffold374.1 |
| Synonym | pfu_aug1.0_6143.1_45358 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| methylmalonyl- mitochondrial isoform x1 | GO:0004494 GO:0005739 GO:0009791 GO:0031419 GO:0046872 GO:0050667 GO:0072341 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_374.1_14066.t1 | 1 | 1 | MM_CoA_mutase | 42 | 557 | 0.0 | 842.1 | 0.0 | 0.0 | 841.9 |
| pfu_aug2.0_374.1_14066.t1 | 2 | 1 | B12-binding | 454 | 469 | 3.6e-12 | 46.2 | 0.55 | 4100.0 | -2.4 |
| pfu_aug2.0_374.1_14066.t1 | 2 | 2 | B12-binding | 597 | 708 | 3.6e-12 | 46.2 | 1.1e-15 | 8.3e-12 | 45.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_374.1_14066.t1 | gi|676452264|ref|XP_009052976.1| | hypothetical protein LOTGIDRAFT_227052 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_374.1_14066.t1 | gi|524873436|ref|XP_005093465.1| | PREDICTED: methylmalonyl-CoA mutase, mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_374.1_14066.t1 | gi|507530817|ref|XP_004649492.1| | PREDICTED: methylmalonyl-CoA mutase, mitochondrial [Jaculus jaculus] | 0.0 |
| pfu_aug2.0_374.1_14066.t1 | gi|533124995|ref|XP_005377731.1| | PREDICTED: methylmalonyl-CoA mutase, mitochondrial-like isoform X1 [Chinchilla lanigera] | 0.0 |
| pfu_aug2.0_374.1_14066.t1 | gi|731231239|ref|XP_010629412.1| | PREDICTED: methylmalonyl-CoA mutase, mitochondrial isoform X1 [Fukomys damarensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_374.1_14066.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_374.1_14066.t1 atgtcacagcctataaaaacttcagtgtggagtaaatgctgttataatgtacccctggatccaaaatggtcagaacaagc aaagaaagagttaaagggaaaagatgtagaggaaacattagtttggaggactcctgagggagtcaacataaagccagtgt attccagtgctgatagtaaagatataccagatgaattccccggccgtttcccttacaccaggggcccgtacagtaccatg tatacacacaggccatggacaatcagacagtatgcaggtttcagtacagtggaagaaagtaacaagttctacagggataa tattgctgcaggacagcagggacttagtgtggctttcgatctaccgactcatagagggtatgactctgacaatccccgtg tccctggtgatgtaggaatggctggtgtagctatagattctgtcgaggacaccaaacttctgtttgacggaattccgctt aacaagatttcgacgtctatgacgatgaacggtgcggtattaccagtcatggctatgtatatagtagcagcagaggaaca gggtgctaagcaggcagaattagccggtactatacagaatgatatacttaaggagtttatggtcaggaacacgtacatat tccctccagagccgtccatgaaggtcatcggtgatatatttgaatacacatccaagaacatgcctaagtttaattcgatt tcaatctctggttaccacatgcaagaagctggtgctgatgccatattagagcttgcctttactttggctgacggattaca gtacatcagaactggtatagagagaggtttggatgtggacaagtttgctcccagactctccttcttctggggtattggta tgaacttttacatggaaattgccaagctgagggctgccaggaggttatgggcgaatcttgtaaaggaaaaattccagccc aaaaatcctaaatctttattacttagagctcatagtcaaacttcaggatggtcactcacagaacaggatgcctataacaa cattgtacgtacagcgatagaggccatggcggccgtatttggaggtacacaatctctacacactaactcgtttgacgagg cgttaggactacccacaccgtttagcgctcgcatcgccagaaatactcagcttattctgcaggaggagtcaggaatacca aacgtggcagatccatggggtggatcatacttgatggagagtctgaccaatgatatctatgatgctgctcttaaagtcat taatgagatagaggagatgggaggcatggctaaggccgtagcatcaggaatgcctaagttacgtatagaggaatgtgctg ctagacgacaggccaggattgataacggagcagaggtgatagtgggcgtgaacaaataccgacccacggaggagcacgct gttgacgtactatgtatagacaatactaaggtccgacagcagcagatagaaaggctccaaaaagtacgagcctccagaga tgaggccaaggctaacaagtgtctggaagctataactaaatgctgtcagactaaagatgggaacctgttaggtctgagta tagaagctgcccgggctagatgtactgttggagagattactaatgccatggaaaaggtttatggtagacatgtagctagt gacagattggttagcggtgcttacaaaacagaatacggagaggtggaagaaatagacaaagtcatcaagagggttgagaa atttgccgaggaggaagggagacgacctaggattctggttgctaaggtcggacaagatggtcacgacagagggggcaagg tcatcgctacgggattcgctgaccttggatttgatgttgatatcgggcctctttttgcgacaccaaaggaggcggctcaa caggctgtcgatgctgacgttcatgttttaggagttagctcccttgctgccggacacagaacgcttattcctgaaatggt ggaagaactcaaaaagatgggacgaggtgacattattgtagtagcaggaggagttattccccctcaggactatgactttt tgtatgattctggggtatctgccgtatttggacctggaacaagaatacctgatgctgcgataaaggtgttagatgtgctt gagaaaaataacagtccagctgcctcgcaaacggcatga |
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Protein
| Protein ID | pfu_aug2.0_374.1_14066.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_374.1_14066.t1 MSQPIKTSVWSKCCYNVPLDPKWSEQAKKELKGKDVEETLVWRTPEGVNIKPVYSSADSKDIPDEFPGRFPYTRGPYSTM YTHRPWTIRQYAGFSTVEESNKFYRDNIAAGQQGLSVAFDLPTHRGYDSDNPRVPGDVGMAGVAIDSVEDTKLLFDGIPL NKISTSMTMNGAVLPVMAMYIVAAEEQGAKQAELAGTIQNDILKEFMVRNTYIFPPEPSMKVIGDIFEYTSKNMPKFNSI SISGYHMQEAGADAILELAFTLADGLQYIRTGIERGLDVDKFAPRLSFFWGIGMNFYMEIAKLRAARRLWANLVKEKFQP KNPKSLLLRAHSQTSGWSLTEQDAYNNIVRTAIEAMAAVFGGTQSLHTNSFDEALGLPTPFSARIARNTQLILQEESGIP NVADPWGGSYLMESLTNDIYDAALKVINEIEEMGGMAKAVASGMPKLRIEECAARRQARIDNGAEVIVGVNKYRPTEEHA VDVLCIDNTKVRQQQIERLQKVRASRDEAKANKCLEAITKCCQTKDGNLLGLSIEAARARCTVGEITNAMEKVYGRHVAS DRLVSGAYKTEYGEVEEIDKVIKRVEKFAEEEGRRPRILVAKVGQDGHDRGGKVIATGFADLGFDVDIGPLFATPKEAAQ QAVDADVHVLGVSSLAAGHRTLIPEMVEELKKMGRGDIIVVAGGVIPPQDYDFLYDSGVSAVFGPGTRIPDAAIKVLDVL EKNNSPAASQTA |
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