Gene
| Gene Model ID | pfu_aug2.0_374.1_14067 |
|---|---|
| Locus | scaffold374.1 : 231705 ... 274466 : + |
| To GenomeBrowser | scaffold374.1:231705..274466 |
| Genes list of scaffold | scaffold374.1 |
| Synonym | pfu_aug1.0_3573.1_52029 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_374.1_14067.t1 | 2 | 1 | 7tm_2 | 236 | 307 | 8.9e-35 | 119.9 | 4.3e-25 | 2.1e-21 | 76.0 |
| pfu_aug2.0_374.1_14067.t1 | 2 | 2 | 7tm_2 | 310 | 378 | 8.9e-35 | 119.9 | 1.6e-15 | 8.1e-12 | 44.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_374.1_14067.t1 | gi|591364451|ref|XP_007057125.1| | PREDICTED: LOW QUALITY PROTEIN: secretin receptor [Chelonia mydas] | 5.0e-38 |
| pfu_aug2.0_374.1_14067.t1 | gi|554846839|ref|XP_005933737.1| | PREDICTED: vasoactive intestinal polypeptide receptor-like isoform X2 [Haplochromis burtoni] | 1.0e-37 |
| pfu_aug2.0_374.1_14067.t1 | gi|499029418|ref|XP_004565427.1| | 1.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_374.1_14067.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_374.1_14067.t1 atgccgccgggaaaggtgtacataagtccggaggagcaacagcagcagctttatctagaacatatagaatgtctgaagaa gatgttatacggacctagaagcagctcagacctaagttggacgacagttgcattatccaatataggaaagctgggtgtat ctgcttcttttgctgttatttttattttcacaccagaattatacccaacaaaattacgtggcagtaccttagggttgaca aattttattgggagagctgggggagtggtttcaccttatattgcagatttgagccttattgtacacagtgacttgaaggt ggccctgccattgatagtgtttggtggactgatgataggatcaggacttctagctttcacattaccagaaactctgggta gaaaactcccagaaactattgaagaggcagaagctatgacaagtcgcattttctacgcggctaatagaaaggagaggatc tccaacaatactcgtttgcagcacccaaggcgaaacccgctaaagagacggatgttgctagcaacagggagatgcctact cctcccggattttgcttcgagaaaatgtatggcagacggccaatggtatgttcatccgggacttaataccacgtggtcag attattcaaactgttacgacatacaaccgtctgcaaacactcccaaagtgggtagtgtcttagagcactgggagtgtaag accctattcgtgtgtttttactacgtgctttcatgtagttatatgtggatttttgtggaaggcctccatctccatgtact cattatggtatctgtgttttctgagaggagcagtgtcaaatggtacatcgccattggatggggtgttccagtactgttta taattccatgggctattgtgcgagctctctatgaagacaccctagctcttatgactaagatcaagattaacagatcacgg gcatcatcaagtaataagtacaaacgatttgccaaagccacccttgttttgatacccctttttggggttcagtatgttgt ttttattggtttccctgacaacctcgaaccggaagtggaagtagtaaagctgtactttgagatgttcttcaattcttttc agggattattagttgcagtactattctgttttcttaatggagaggtacaaacagaaattatgaaagtagtatgtaaacgt ggaccatactacagatatagacgctactatcgcgcatcatttttgggcaactcccagtgcgcatgtcaaaggacaaaatc atctccaaatatgtcggacaacaaaagcagacgagcttcagctgatattagttcctgtttattagcagattcaaaatcaa aatttgtgaaatcatgttactgtcattggcacgtagattccaagggacacctttgcagacattttatcaagaggagtacc aataaaacctgcgcccatgaaaataatttacgaagagcggaaagctgtttatga |
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Protein
| Protein ID | pfu_aug2.0_374.1_14067.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_374.1_14067.t1 MPPGKVYISPEEQQQQLYLEHIECLKKMLYGPRSSSDLSWTTVALSNIGKLGVSASFAVIFIFTPELYPTKLRGSTLGLT NFIGRAGGVVSPYIADLSLIVHSDLKVALPLIVFGGLMIGSGLLAFTLPETLGRKLPETIEEAEAMTSRIFYAANRKERI SNNTRLQHPRRNPLKRRMLLATGRCLLLPDFASRKCMADGQWYVHPGLNTTWSDYSNCYDIQPSANTPKVGSVLEHWECK TLFVCFYYVLSCSYMWIFVEGLHLHVLIMVSVFSERSSVKWYIAIGWGVPVLFIIPWAIVRALYEDTLALMTKIKINRSR ASSSNKYKRFAKATLVLIPLFGVQYVVFIGFPDNLEPEVEVVKLYFEMFFNSFQGLLVAVLFCFLNGEVQTEIMKVVCKR GPYYRYRRYYRASFLGNSQCACQRTKSSPNMSDNKSRRASADISSCLLADSKSKFVKSCYCHWHVDSKGHLCRHFIKRST NKTCAHENNLRRAESCL |
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