Gene
| Gene Model ID | pfu_aug2.0_375.1_17342 |
|---|---|
| Locus | scaffold375.1 : 45106 ... 51912 : + |
| To GenomeBrowser | scaffold375.1:45106..51912 |
| Genes list of scaffold | scaffold375.1 |
| Synonym | pfu_aug1.0_8233.1_24359 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_375.1_17342.t1 | 2 | 1 | Pyr_redox | 37 | 77 | 4.2e-06 | 27.0 | 4.8e-08 | 5.9e-05 | 23.3 |
| pfu_aug2.0_375.1_17342.t1 | 2 | 1 | Pyr_redox_3 | 39 | 105 | 4.7e-07 | 30.0 | 1.2e-09 | 1.4e-06 | 28.4 |
| pfu_aug2.0_375.1_17342.t1 | 1 | 1 | NAD_binding_8 | 40 | 101 | 3.4e-09 | 36.5 | 6.1e-12 | 7.5e-09 | 35.4 |
| pfu_aug2.0_375.1_17342.t1 | 2 | 2 | Pyr_redox | 97 | 124 | 4.2e-06 | 27.0 | 0.42 | 520.0 | 1.1 |
| pfu_aug2.0_375.1_17342.t1 | 2 | 2 | Pyr_redox_3 | 260 | 305 | 4.7e-07 | 30.0 | 3.7 | 4500.0 | -2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_375.1_17342.t1 | gi|698782683|ref|XP_009824385.1| | hypothetical protein H257_02443 [Aphanomyces astaci] | 1.0e-08 |
| pfu_aug2.0_375.1_17342.t1 | gi|195442522|ref|XP_002069003.1| | GK12329 [Drosophila willistoni] | 1.0e-08 |
| pfu_aug2.0_375.1_17342.t1 | gi|698804600|ref|XP_009835329.1| | hypothetical protein H257_10464 [Aphanomyces astaci] | 4.0e-07 |
| pfu_aug2.0_375.1_17342.t1 | gi|698826794|ref|XP_009846425.1| | hypothetical protein H257_18972 [Aphanomyces astaci] | 4.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_375.1_17342.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_375.1_17342.t1 atgctagtttataaagtgtgcataatttcaacaatcatcgtccttgctcgatgtcaaataggaacgccgaaggtacgtga aatccctggaccaagatcttttgatgaccgtatagctattataggcgctgggccatctgggatccacatggcattcagat taaaggaacttggttttagaaatgtagaagtgctagaaagagaggacagaataggcggaagggtgtttgacgttcttcac cgtggcactgtacaacaactaacgttcttcgccattctaccagattatgatgaattacggagattcaacattgacgtgaa gttgagaacaaatataaaaaggatacgacgcttcagaaattctccaaatggaaatgttgaaattcaatacagtcgacgtg atgatccgtttaggactttttcaagatattatgattttctaattgtttcgcctccaatgcggaatctcatgaatgttatg gatgcctctaataaggaaagaaaaatattcaatcgtcaaatcacagatacttacttcatttcctctttggttgatcaccc atacggtataagatcggatcgaccaaacgatgcctttccagaaactttgcttcgatacaacttcgagccttacgcttcca ttgatattttctccatgactcagaatttttcaggggaaccttacacgagcggtcttactccagggggatttgatggtagg aaagtccaatcttctgtcatttaccagctaggacgtttggatccgaaaattcctttcgtaatgcgcgatgcagaaaataa actatggcgtcatatgagagataagcagcgcataccctatagcgtggttgcacgacttatttgtccatatttcacacggt tttcagtccgtgatatggatagaggtttaatttgggatgttcttgatctacaaggacaaaggaatacatggtacataggt ggttctgtcacctttgacagtgcaggtgctgttatacaatataacaacaagcttcttcgacattatgtacctcctcaacg tggatacatcctaccttga |
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Protein
| Protein ID | pfu_aug2.0_375.1_17342.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_375.1_17342.t1 MLVYKVCIISTIIVLARCQIGTPKVREIPGPRSFDDRIAIIGAGPSGIHMAFRLKELGFRNVEVLEREDRIGGRVFDVLH RGTVQQLTFFAILPDYDELRRFNIDVKLRTNIKRIRRFRNSPNGNVEIQYSRRDDPFRTFSRYYDFLIVSPPMRNLMNVM DASNKERKIFNRQITDTYFISSLVDHPYGIRSDRPNDAFPETLLRYNFEPYASIDIFSMTQNFSGEPYTSGLTPGGFDGR KVQSSVIYQLGRLDPKIPFVMRDAENKLWRHMRDKQRIPYSVVARLICPYFTRFSVRDMDRGLIWDVLDLQGQRNTWYIG GSVTFDSAGAVIQYNNKLLRHYVPPQRGYILP |
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