Gene
| Gene Model ID | pfu_aug2.0_375.1_17344 |
|---|---|
| Locus | scaffold375.1 : 118197 ... 142875 : - |
| To GenomeBrowser | scaffold375.1:118197..142875 |
| Genes list of scaffold | scaffold375.1 |
| Synonym | pfu_aug1.0_7368.1_67683 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| signal transducer and activator of transcription 5b | GO:0006351 GO:0044424 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_375.1_17344.t1 | 1 | 1 | STAT_int | 6 | 106 | 2.3e-21 | 76.0 | 1.2e-24 | 5.7e-21 | 74.7 |
| pfu_aug2.0_375.1_17344.t1 | 1 | 1 | STAT_bind | 140 | 390 | 0.0 | 253.9 | 0.0 | 0.0 | 253.1 |
| pfu_aug2.0_375.1_17344.t1 | 1 | 1 | SH2 | 402 | 488 | 1.9e-08 | 33.9 | 9.8e-12 | 4.8e-08 | 32.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_375.1_17344.t1 | gi|524890199|ref|XP_005101648.1| | PREDICTED: signal transducer and activator of transcription 5B-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_375.1_17344.t1 | gi|345485405|ref|XP_001605495.2| | PREDICTED: signal transducer and activator of transcription 5B [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_375.1_17344.t1 | gi|585652579|ref|XP_006814943.1| | PREDICTED: signal transducer and activator of transcription 5B isoform X3 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_375.1_17344.t1 | gi|268054341|gb|ACY92657.1| | STAT5-like protein [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_375.1_17344.t1 | gi|665790393|ref|XP_008560881.1| | PREDICTED: signal transducer and activator of transcription 5B [Microplitis demolitor] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_375.1_17344.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_375.1_17344.t1 atggatcaggcggaatcacagtggatgcgatgctgtagtttaccgcgggaattactgcgccatctacagttagcttataa caaccagtttcctatagagctacggcattattgtgccgattggatagaagcacaggcatgggaccaaatcaacgaggacg acccagaccatatagggtacgctagtcagttatttgatggtttagtaagccagatacagactgtggaggaccaggcagcc atccctgaaaacccaggaggctcccaggctttcttactcaaaatgaaactacaggaaataaaggccaatatgaggacaga taatatggtgagatataccttgtttggaattcatattcccctcgccttcagctcgggaaataaaaattccagacaaggga gagtagaaagccttacatttattgtggagagccagccccctcaagtattaaagaaggaatccagattctccgcgcgagtc agacttttggtgggaggtaaactcaacatctatatgactccgccacaagtcagagcatcaatcattagtgaagtgcaggc cagaaatttgttgaagaatgactcctcggcaaagaaagatacctgtggtgacatagccaataacatgggtatgatggaat acaaccaacagaaaggggagctcagtattgaattcagaaacatgcaacttcgccgtatacgtcgtgcagacaagcgaggc gcagaggcagtgacggaagaaaagttctgtattctgttccagtcagacttccaaatcggtaacggtgaactgatgttcca agtatggacgctatctctgccggttgttgtaacggtgcatggtaaccaggaatgcaatgccttggccacggttctgtggg acaaccaattcaatgaaccgggtagacaaccctttactgtaccagaacatgttccttggcccaaaatggctgaattactg aacatcaaattctcatcaatgtgtggaaggaaactcagtccagataatctgaaatatttggctacaaaattgtttggagg cagttccccacatgatgatttttcaaacagaatggtgacatggagcatgtttaataaggacaccatgcagcacccaaatc gtagctttacattctgggaatggttttactcaatagccaagcttaccaaggagcatcttaaaggaccatggtcagatggg ttaatcatgggttttataagtaaggaaggaagccaggaagtgttgaagaattccatgccgggaacgttcctcctacgtta cagtgacagctctatagggggtataaccatagcctggtctgcagaagatcctaatatgcccaaggacagcttggtaaaag ctcccatccaaatttggaacttggctccgttttctgtgaaggatttctccatccgatctcttgccgacagaatcaaggat cttccccagctggtgaacttgtatccaagcaaccccaaaaaccaggccttcaaaaagtacttctccaaagtagatgttaa agacccaaaagaaggttatgtgaaaccagagctgattcaagtcataaaaagttctgatgtagagaccagaaattgtattg gacaacagatgatggtagacaaccctgctactccatcagccatgtctgatatgacagaagcccattcaccaaatccttct gaaaatccactctctccctctgtcagtgcagcgataaatgccgccatctctggggacgtgatggaggatgatacggacat aatgctcgactacgacttcgatcgtatgatcgttcagaacgtcaaccaaatgcttaaccaaaacagtatggggatttcgc agataaatccgttatcgcaggtcagtccgttgtcccaggtcaacagctcggtgccgcaagttaatggattgccgcaggtt aatgccataaatacaatgtctcagatgagctcaatgccgcaggcaaatggcacagttccaatggtcagtaatatgccacc tcaaatgaacaacttacagcagtggcctaattcctag |
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Protein
| Protein ID | pfu_aug2.0_375.1_17344.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_375.1_17344.t1 MDQAESQWMRCCSLPRELLRHLQLAYNNQFPIELRHYCADWIEAQAWDQINEDDPDHIGYASQLFDGLVSQIQTVEDQAA IPENPGGSQAFLLKMKLQEIKANMRTDNMVRYTLFGIHIPLAFSSGNKNSRQGRVESLTFIVESQPPQVLKKESRFSARV RLLVGGKLNIYMTPPQVRASIISEVQARNLLKNDSSAKKDTCGDIANNMGMMEYNQQKGELSIEFRNMQLRRIRRADKRG AEAVTEEKFCILFQSDFQIGNGELMFQVWTLSLPVVVTVHGNQECNALATVLWDNQFNEPGRQPFTVPEHVPWPKMAELL NIKFSSMCGRKLSPDNLKYLATKLFGGSSPHDDFSNRMVTWSMFNKDTMQHPNRSFTFWEWFYSIAKLTKEHLKGPWSDG LIMGFISKEGSQEVLKNSMPGTFLLRYSDSSIGGITIAWSAEDPNMPKDSLVKAPIQIWNLAPFSVKDFSIRSLADRIKD LPQLVNLYPSNPKNQAFKKYFSKVDVKDPKEGYVKPELIQVIKSSDVETRNCIGQQMMVDNPATPSAMSDMTEAHSPNPS ENPLSPSVSAAINAAISGDVMEDDTDIMLDYDFDRMIVQNVNQMLNQNSMGISQINPLSQVSPLSQVNSSVPQVNGLPQV NAINTMSQMSSMPQANGTVPMVSNMPPQMNNLQQWPNS |
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