Gene
| Gene Model ID | pfu_aug2.0_375.1_17345 |
|---|---|
| Locus | scaffold375.1 : 153406 ... 177362 : + |
| To GenomeBrowser | scaffold375.1:153406..177362 |
| Genes list of scaffold | scaffold375.1 |
| Synonym | pfu_aug1.0_7368.1_67682 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_375.1_17345.t1 | 3 | 1 | Nramp | 73 | 119 | 0.0 | 195.8 | 3.6e-15 | 1.1e-11 | 44.1 |
| pfu_aug2.0_375.1_17345.t1 | 3 | 2 | Nramp | 188 | 327 | 0.0 | 195.8 | 0.0 | 1.4013e-45 | 155.1 |
| pfu_aug2.0_375.1_17345.t1 | 3 | 3 | Nramp | 517 | 542 | 0.0 | 195.8 | 0.97 | 2900.0 | -3.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_375.1_17345.t1 | gi|363809049|dbj|BAL41652.1| | 0.0 | |
| pfu_aug2.0_375.1_17345.t1 | gi|260800732|ref|XP_002595251.1| | hypothetical protein BRAFLDRAFT_283466 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_375.1_17345.t1 | gi|676481746|ref|XP_009062480.1| | hypothetical protein LOTGIDRAFT_128586, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_375.1_17345.t1 | gi|751788587|ref|XP_011203761.1| | PREDICTED: protein Malvolio isoform X2 [Bactrocera dorsalis] | 0.0 |
| pfu_aug2.0_375.1_17345.t1 | gi|751788591|ref|XP_011203764.1| | PREDICTED: protein Malvolio isoform X4 [Bactrocera dorsalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_375.1_17345.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_375.1_17345.t1 atggcaaatagtaccactgacgtaccatatactaaatttcatgacaatgataaaaaagaatcaaatgacgaaagagaaaa cgagaaacgatatgaaataaaacctggacaagtgcgcatacctcacatagaagggacaaaattcagttttaggaagttat gggcgtttacaggtccaggattcttgatgagcattgcctaccttgaccctggtaatatagagtctgatctgcaatctgga gctatcgcaaaatacaagttgctatgggtactgatgtggtctacagtccttggccttgttctccaactactggcagctag acttggttgtgtaacagcttccgatatggcaaatagtaccactgacgtaccatatactaaatttcatgacaatgataaaa aagaatcaaatgacgaaagagaaaatgagaaacaatatgaaataaaacctggacaagtgcgcatacctcacatagaaggg acaaaattcagttttaggaagttatgggcgtttacaggtccaggatttttgatgagcattgcctaccttgaccctggtaa tatagagtctgatctgcaatctggagctatcgcaaaatacaagttgctatgggtactgatgtggtctacagtccttggcc ttgttctccaactactggcagctagacttggttgtgtaacaggaatgcatctagcagaaatatgtcgtcacgaattccca aagaaaccaagaatagcactgtggttgatgatggaagtcgccattgtcggaaatgacatacaggaagttgtaggctccgc cattgctatcaatcttctgtccaatcaggtgatacctatttgggcaggggtgttgattacaggtgtagataccttcacct ttttattcctggagaattacggactccgtaaattagaggcgttctttggagctctcatcaccgcaatggtggggtctttt atgtacatatcaagaatagttgacagaacaaataaaaaagaagtcaaggaagcagttatgtacaacggcatagaatcagg tgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatg atgatgatgacgacgacgacgacgaaggcgaagatgatgatgattgtggtggtggtggcggcggtggcggcggtggctgt ggtgatgttgatgatgatctgtatttttctattcttcagaggaatggagatctcatacaaaactcggttgcagcatccac aacaaaacacagaaacaaccaatatgcgaaaacacagagaatacatacacagcaacatgtactaaagtcttacancgacg acgacgacgacgacgacgacgacgacgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgat gatgatgattgtggtggcggcggtggctttggtgatgttgatgatgagctgtatttttctattcctcaggggttaggtca gccatggtatgtttatttcatcgcttctatcgtcattctcatctattcatcgtttgttatatatatacattcgctgtacc tgaaattaggttgggatacggaaaaattagacgaggacatagtacgaagggcggcgtcccactacatgataaacagcgta cccgagggaagcctggaggacgaagtcaacgtcagaccacaagtctga |
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Protein
| Protein ID | pfu_aug2.0_375.1_17345.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_375.1_17345.t1 MANSTTDVPYTKFHDNDKKESNDERENEKRYEIKPGQVRIPHIEGTKFSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSG AIAKYKLLWVLMWSTVLGLVLQLLAARLGCVTASDMANSTTDVPYTKFHDNDKKESNDERENEKQYEIKPGQVRIPHIEG TKFSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAIAKYKLLWVLMWSTVLGLVLQLLAARLGCVTGMHLAEICRHEFP KKPRIALWLMMEVAIVGNDIQEVVGSAIAINLLSNQVIPIWAGVLITGVDTFTFLFLENYGLRKLEAFFGALITAMVGSF MYISRIVDRTNKKEVKEAVMYNGIESGDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEGEDDDDCGGGGGGGGGGC GDVDDDLYFSILQRNGDLIQNSVAASTTKHRNNQYAKTQRIHTQQHVLKSYXDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDCGGGGGFGDVDDELYFSIPQGLGQPWYVYFIASIVILIYSSFVIYIHSLYLKLGWDTEKLDEDIVRRAASHYMINSV PEGSLEDEVNVRPQV |
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