Gene
| Gene Model ID | pfu_aug2.0_375.1_17351 |
|---|---|
| Locus | scaffold375.1 : 269006 ... 280931 : - |
| To GenomeBrowser | scaffold375.1:269006..280931 |
| Genes list of scaffold | scaffold375.1 |
| Synonym | pfu_aug1.0_243.1_58034 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pyruvate dehydrogenase e1 component subunit somatic mitochondrial | GO:0004739 GO:0006096 GO:0043231 GO:0044444 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_375.1_17351.t1 | 1 | 1 | E1_dh | 66 | 357 | 0.0 | 395.6 | 0.0 | 0.0 | 395.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_375.1_17351.t1 | gi|676447013|ref|XP_009051268.1| | hypothetical protein LOTGIDRAFT_201812 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_375.1_17351.t1 | gi|524891584|ref|XP_005102325.1| | PREDICTED: probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_375.1_17351.t1 | gi|675879980|ref|XP_009025509.1| | hypothetical protein HELRODRAFT_189197 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_375.1_17351.t1 | gi|391346705|ref|XP_003747609.1| | PREDICTED: probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like [Metaseiulus occidentalis] | 0.0 |
| pfu_aug2.0_375.1_17351.t1 | gi|589920472|ref|XP_006973298.1| | PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial [Peromyscus maniculatus bairdii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_375.1_17351.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_375.1_17351.t1 atgttttcagttgcttttcggtctgggagacatttttccttgccaagatcattccttggtattgctcaaagtggaaaata ctcaacagctgcagatgcaacatttaacataaaggaatgtgatctacataggcttgagaagggacctccagctacaacaa catgtacacgagaggatgccctcaaattctacagagaaatgtctatgataagaaggatggagaccacggcagctaacctg tacaaatccaagcaaatcagaggattctgtcatctctactcaggacaggaagcatgctgtgttggaatggaggcagcaat aactaaggatgattctgtgataacagcctatagagctcatggctggacttatatcagaggtgttagtgtgttgggggtac tagcagagctcacaggtaaatcgtctggttgtgcaataggaaaaggaggatctatgcacatgtactgcaaaaacttctat ggaggaaatggtatagtgggagcccaggtaccccttggagctggtatagcatttgcaataaagtaccgtggggagcctaa tgtatgcataacattgtacggtgatggtgcagctaaccagggtcaggtgttcgaggctttcaacatggcaaagctatgga acctaccatgtatatttgtctgtgagaacaatggatatggtatgggaaccagtgcagacagagcatcggcatgtatagat tattataccaggggagattatgtaccaggaatgagggttgatggaatggatgtgttagctgtcagagaggccactaagtt tgctaaggattacgtccttactaatggacctatcttactagagacagccacttaccgctaccatggacatagtatgagtg atcctggaacgagctaccgcaccagagaagaaattcaacagaagagggagaagtttgatcccatttcaacattcaaacag aaaattgtcacagcaaacttagttactgcagatgaaataaagaaaattgaagctgaagttcgaaaagaagtagacgaggc agcagaaagagctaagacggaccctgagattcctctgaaggaactgtataaccaaatatattaccaacccccgaaggact atcatgttagaggctgtgacattacaatccaagcaccatcatcgtga |
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Protein
| Protein ID | pfu_aug2.0_375.1_17351.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_375.1_17351.t1 MFSVAFRSGRHFSLPRSFLGIAQSGKYSTAADATFNIKECDLHRLEKGPPATTTCTREDALKFYREMSMIRRMETTAANL YKSKQIRGFCHLYSGQEACCVGMEAAITKDDSVITAYRAHGWTYIRGVSVLGVLAELTGKSSGCAIGKGGSMHMYCKNFY GGNGIVGAQVPLGAGIAFAIKYRGEPNVCITLYGDGAANQGQVFEAFNMAKLWNLPCIFVCENNGYGMGTSADRASACID YYTRGDYVPGMRVDGMDVLAVREATKFAKDYVLTNGPILLETATYRYHGHSMSDPGTSYRTREEIQQKREKFDPISTFKQ KIVTANLVTADEIKKIEAEVRKEVDEAAERAKTDPEIPLKELYNQIYYQPPKDYHVRGCDITIQAPSS |
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