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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_3752.1_09218
Locus scaffold3752.1 : 19546 ... 20662 : +
To GenomeBrowser scaffold3752.1:19546..20662
Genes list of scaffold scaffold3752.1
Synonym pfu_aug1.0_147670.1_71861

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_3752.1_09218.t1 gi|676480412|ref|XP_009062053.1| hypothetical protein LOTGIDRAFT_154590 [Lottia gigantea] 0.0
pfu_aug2.0_3752.1_09218.t1 gi|676428818|ref|XP_009045398.1| hypothetical protein LOTGIDRAFT_110513, partial [Lottia gigantea] 7.0e-31
pfu_aug2.0_3752.1_09218.t1 gi|62859603|ref|NP_001017107.1| meteorin-like protein precursor [Xenopus (Silurana) tropicalis] 6.0e-27
pfu_aug2.0_3752.1_09218.t1 gi|611995035|ref|XP_007483485.1| PREDICTED: meteorin-like protein isoform X4 [Monodelphis domestica] 1.0e-25
pfu_aug2.0_3752.1_09218.t1 gi|334323471|ref|XP_001374199.2| PREDICTED: meteorin-like protein isoform X1 [Monodelphis domestica] 2.0e-25

Transcript
Transcript IDpfu_aug2.0_3752.1_09218.t1
Definition-
>pfu_aug2.0_3752.1_09218.t1
atgaatctagtgacagtatttactgcagtatttcaagggtttgctcatgaaatatgtgaatcatgtgattgtttattaag
tgacctcccaaattcagaacacggagtccgaagtgtgaagaccatctgtgacgaggggaaaatagagtggtatagtccat
acggggcgctcagcatcgagctcaagtatagcagatccggtagctatcgcgcatgtttcatgatagaaagtgttaataca
gaacttcaagtatccgaagaatcatggaataattctgagtttccattatctcgtagacttccaccagcggcatctttaaa
acctttagtgagcattaatggcaaccataaagaattttgtgtgacgtcattaacaccggtgatactatatttagaacctg
ttaggactcaagagatgtctggtctttctcatgtgaagtttcagtatttattagaatctagaaatttcaaggctgaattg
gacccaatagaagaatgtcggccttgtagtaaagcagagttaataatggcatattgttcaagtgattttgttatagaggg
acgcatggcaaatgtgacgcataaagaagaggaaagcaaatcgtacgttggcgtgcatgtatctcgggtgattcgccagc
gtgactctacacttttttacagaccgcatcgtgacagcaaagaactttacggtcacatggtcattccaagacattgtggg
gcaaagaagagtaaaggcacattcttattcgccggaaaagttcggtttggagaaccgacaaaatcttgctcattatattt
ggacgattgggagagaatagcagcaaatgcagtaaaagatggtgacatgttgtgtacgttaaaataa

Protein
Protein IDpfu_aug2.0_3752.1_09218.t1
Definition-
>pfu_aug2.0_3752.1_09218.t1
MNLVTVFTAVFQGFAHEICESCDCLLSDLPNSEHGVRSVKTICDEGKIEWYSPYGALSIELKYSRSGSYRACFMIESVNT
ELQVSEESWNNSEFPLSRRLPPAASLKPLVSINGNHKEFCVTSLTPVILYLEPVRTQEMSGLSHVKFQYLLESRNFKAEL
DPIEECRPCSKAELIMAYCSSDFVIEGRMANVTHKEEESKSYVGVHVSRVIRQRDSTLFYRPHRDSKELYGHMVIPRHCG
AKKSKGTFLFAGKVRFGEPTKSCSLYLDDWERIAANAVKDGDMLCTLK

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