Gene
| Gene Model ID | pfu_aug2.0_377.1_23940 |
|---|---|
| Locus | scaffold377.1 : 34746 ... 39291 : + |
| To GenomeBrowser | scaffold377.1:34746..39291 |
| Genes list of scaffold | scaffold377.1 |
| Synonym | pfu_aug1.0_7069.1_02374 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_377.1_23940.t1 | 1 | 1 | DDE_Tnp_4 | 163 | 252 | 1.2e-11 | 44.4 | 1.3e-15 | 1.9e-11 | 43.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_377.1_23940.t1 | gi|390343380|ref|XP_001179403.2| | 0.0 | |
| pfu_aug2.0_377.1_23940.t1 | gi|676475786|ref|XP_009060584.1| | hypothetical protein LOTGIDRAFT_74528, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_377.1_23940.t1 | gi|695409675|ref|XP_009524983.1| | hypothetical protein PHYSODRAFT_489016 [Phytophthora sojae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_377.1_23940.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_377.1_23940.t1 atggcgcttgactcaagaaccctcgctgcaatttctggcgacgacgaccttcttctgctttcacttatgcataatgatga gaaacatcaaccaattctttacttacaagataatttttatagtcagtataaacaattatttcggtttgatagaccagggc tgttacatgtggaaatacaatctgcaatgggctttcccgagttcatgagctgtccaaatagaacgaaatttaacagtatg gaaggtctccatgtgcttatcagaagactttcgtatcccaacagactagaggatctttctttgttgtttggtagaacgaa gtttgagttgtcaaacattttcaacactactcttgattttatttatgagaagtacgagcttcttcttcttaccctgaaca gaccctggttatcacctgcttatcttgatgccatgaaaactgctgtgtcagataagggtagtcctttggataactgctgg ggcttcattgatggtaccatacgccctatatgtagaccaaaacagagccagagggtagtctacagcggacacaaacgtgt acatgggctcaagtttcagagtataatggcgccgaatgggatgattgcacttttctatggaccaattgaggggagacgtc atgatgccggtatgttacgagaaagtggggtcgagacggaaatgcaacatatgatgaataggccaaacaatgatgtattt tgtgtatatggggaccccgcgtaccctttaacaccaagctcgtttcaataa |
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Protein
| Protein ID | pfu_aug2.0_377.1_23940.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_377.1_23940.t1 MALDSRTLAAISGDDDLLLLSLMHNDEKHQPILYLQDNFYSQYKQLFRFDRPGLLHVEIQSAMGFPEFMSCPNRTKFNSM EGLHVLIRRLSYPNRLEDLSLLFGRTKFELSNIFNTTLDFIYEKYELLLLTLNRPWLSPAYLDAMKTAVSDKGSPLDNCW GFIDGTIRPICRPKQSQRVVYSGHKRVHGLKFQSIMAPNGMIALFYGPIEGRRHDAGMLRESGVETEMQHMMNRPNNDVF CVYGDPAYPLTPSSFQ |
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