Gene
| Gene Model ID | pfu_aug2.0_378.1_27319 |
|---|---|
| Locus | scaffold378.1 : 27435 ... 54715 : - |
| To GenomeBrowser | scaffold378.1:27435..54715 |
| Genes list of scaffold | scaffold378.1 |
| Synonym | pfu_aug1.0_639.1_50988 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_378.1_27319.t1 | 3 | 1 | MAM | 211 | 243 | 2.5e-14 | 53.3 | 1.5 | 4400.0 | -2.7 |
| pfu_aug2.0_378.1_27319.t1 | 3 | 2 | MAM | 831 | 942 | 2.5e-14 | 53.3 | 8.2e-15 | 2.4e-11 | 43.6 |
| pfu_aug2.0_378.1_27319.t1 | 3 | 3 | MAM | 958 | 1015 | 2.5e-14 | 53.3 | 0.0025 | 7.3 | 6.3 |
| pfu_aug2.0_378.1_27319.t1 | 1 | 1 | Lectin_C | 1023 | 1097 | 8.4e-07 | 29.5 | 1.0e-09 | 3.1e-06 | 27.7 |
Transcript
| Transcript ID | pfu_aug2.0_378.1_27319.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_378.1_27319.t1 atgatattgaaaaaaattaaagattttgatgataaaccagaatcatttggctcttggaaacagaccttccgagatgtggc taatgaacttaatcttagtgcggcggaggaagttgacctacttattcggtatctgggacccgagtctaagaagtctgcgg tcagcattccttctgcaaattatagtgaatcgagtcttgctaaagataggattttgcagagattaacagatcgttatgct cgacccaagatggttgaatcatctgtgaagcagaagctcttatcgttacagaaaattacatacaaagacttaaagcgtct gtatgacccatttgatatagtagtagagatcgactcactcaaaaaggaggacaagtgcagaagtctgttagcgtcttatt actcatcgaccggagtcaatttgagagtggcaaagctcccatatcagttacaaaaatcgactacggaagccagtaggtac aaagaggaacatgatacagcattcccgccatttcatgttttcgcttcttttctagaaaacatggttagaaggaaaaacga tccttcatttgcggatccgaataaagggaaaccggcaatcgattttggtggttcacaaccgcatgttattgtgaaaagca ctgacctatcggaacacgagagcaaaggaccattatgccccctgcataaaacttcacacacattgaataaatgtcttcaa tttcgacagaagccgatacaagagcggaaggactttattcgtagcaaatacatatgctttaaatgttgtggtagtaagcc tcacttagcaaaacactgtcggtcaaccgtgaaatgtggtatttttgaggcacaatatcctacagctttacacgaggaca aagccgaacaaacagttgaaaaactgtatgtacaagataaccctacacaggaacttgaagttacatcgagatgcacgtct gtatccggatcgagtaggtcgtgtgcaaaatctatactcgttaaagtgtacccggaagggcaagaagatcgagcacttga actgtatgcaatcatcgatgagcagagtaatctgttacttgcaagatcgtcgctttttgatcattttggaatgcacggcc gtagatgttcctccctgattattgaatctctagattttaagtgtaaaatgacattaccgacactaatagagtgcgaccat ataccgaatcgcagagaggaaattccgtcaccgtcggcagcaaaaatggtttggaaggactcattagcgaaccttgaatc cgtaagcatacctagatgttacgctactcttgcgtccaatgaaattattcgtagagaatttcacgtattatctgttgcat ctagaagggctataggtgctgctgtatacctcatatttgatgttaatggcggtcatcaatcaacgtcaccaaatcagtgg acatatatatcatcagtggaaaatccagctgatatagccacgcgttcaattgcaacagccgatattacccaaagtgcttg gatcaaaggacctacatttctacaggatacgaattcagccgtgttatctaccacagtcgattatccgatgattcacccgg attctgacaccgaagtcagacctacagtaaatgtttcgaaaacagctcgcacttcacaagatgataacggcatattacgt gtaggaggacgtttgaaacgttacaaggatgtagatgaaagtgacttccatccgataataaccccgagaaagcatcatat tggagagcttattattcgtcattgtcatgaaggtgtacagcaccaaggccgtcaccttacggaagaagtgtgttctatca tcaattcacgacccatcattcctgttttatctgatcccgagaattctacagtattgacaccgaacattttgctcacacag aagatatatgctcttcctaatgacttaccttatctcgatatcaaggatgcgtatcgcgctcaatggaagcatgttgttgt tcttgcgcaagcgttctggaagaaatggcgtgaacaatacctagctggacttcaagtcgaacgtaaatggacatctgttg aaaatgacctcaaagtaggagatatagtgttaatgcgagatgaccaaatacatagaaatagctggcctattgttgtagtt gaggaggtttatcctagtgaggaaaataatgtgcttaaagttcgaattcgcgtcggaccagaccgaaaactgttcacttt ctccgttaaaatgttgataacatctttaattttggggaatcttatccttctggccttttctgccagtactcctaaagata aatgtatgtcaatgcatgttttccaaaccacgtacaatgctgtgaaggagaaaatccaggaaatgaacacgttagcagaa cgtctgaaagaaaaactggaccagtcaattgatgacacatgtgagagtttggcaaatcaagtgacgtctcatccgtacaa tctaacgtactgtgattttgaggagggatatgagaggtgtggctatacccaggggacaggggattatggtagttggaagt tagataaatcttactacgaagaccatactattggcattaaatctggtcaacttttacaaagttccactacctcaaatcgc tatgccactcggatggtgtcaccggagttccaacctacagtagcgtattgcatccgattcttctataagacaccttacac agggaattacacgggaaacttcagtatttatctccaggagggtgctgatctaggcgttccagtatggcggaagagtattg ttacatcaaattggacactgggagagttcagtcctgatccagaatacctacgcaagccattcaaggagggatctggactt ggcaatccagtgtggcaaaagtcattggtttcaccagaatggaccttaggagaattcagcccggacccagagtacctacg caaaccattcaagcttgtatttgaagatcggatcggttactatgtcttaattgatgacattatggtgtacaacgcacctt gtgacactgtagaaatgagacaggcagctgcttttggaatatggacccgcggaaatgacatagttaaagagggcagctac gtgtgggcgggaacacacgggaacccaacgcctatcacttacagtaattggcatcctggtcaacccaacaatatcggagg agtacaagattgtgtggccatacagtatccaacccaagatttccaatggggagacgagaactgtggagatgcccacgcct ttatatgtgaggccgaatacatcagtagtcctacacctgctgggcatactccaaatatcggtttcagtgccattggataa |
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Protein
| Protein ID | pfu_aug2.0_378.1_27319.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_378.1_27319.t1 MILKKIKDFDDKPESFGSWKQTFRDVANELNLSAAEEVDLLIRYLGPESKKSAVSIPSANYSESSLAKDRILQRLTDRYA RPKMVESSVKQKLLSLQKITYKDLKRLYDPFDIVVEIDSLKKEDKCRSLLASYYSSTGVNLRVAKLPYQLQKSTTEASRY KEEHDTAFPPFHVFASFLENMVRRKNDPSFADPNKGKPAIDFGGSQPHVIVKSTDLSEHESKGPLCPLHKTSHTLNKCLQ FRQKPIQERKDFIRSKYICFKCCGSKPHLAKHCRSTVKCGIFEAQYPTALHEDKAEQTVEKLYVQDNPTQELEVTSRCTS VSGSSRSCAKSILVKVYPEGQEDRALELYAIIDEQSNLLLARSSLFDHFGMHGRRCSSLIIESLDFKCKMTLPTLIECDH IPNRREEIPSPSAAKMVWKDSLANLESVSIPRCYATLASNEIIRREFHVLSVASRRAIGAAVYLIFDVNGGHQSTSPNQW TYISSVENPADIATRSIATADITQSAWIKGPTFLQDTNSAVLSTTVDYPMIHPDSDTEVRPTVNVSKTARTSQDDNGILR VGGRLKRYKDVDESDFHPIITPRKHHIGELIIRHCHEGVQHQGRHLTEEVCSIINSRPIIPVLSDPENSTVLTPNILLTQ KIYALPNDLPYLDIKDAYRAQWKHVVVLAQAFWKKWREQYLAGLQVERKWTSVENDLKVGDIVLMRDDQIHRNSWPIVVV EEVYPSEENNVLKVRIRVGPDRKLFTFSVKMLITSLILGNLILLAFSASTPKDKCMSMHVFQTTYNAVKEKIQEMNTLAE RLKEKLDQSIDDTCESLANQVTSHPYNLTYCDFEEGYERCGYTQGTGDYGSWKLDKSYYEDHTIGIKSGQLLQSSTTSNR YATRMVSPEFQPTVAYCIRFFYKTPYTGNYTGNFSIYLQEGADLGVPVWRKSIVTSNWTLGEFSPDPEYLRKPFKEGSGL GNPVWQKSLVSPEWTLGEFSPDPEYLRKPFKLVFEDRIGYYVLIDDIMVYNAPCDTVEMRQAAAFGIWTRGNDIVKEGSY VWAGTHGNPTPITYSNWHPGQPNNIGGVQDCVAIQYPTQDFQWGDENCGDAHAFICEAEYISSPTPAGHTPNIGFSAIG |
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