Gene
| Gene Model ID | pfu_aug2.0_378.1_27323 |
|---|---|
| Locus | scaffold378.1 : 260224 ... 275539 : - |
| To GenomeBrowser | scaffold378.1:260224..275539 |
| Genes list of scaffold | scaffold378.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_378.1_27323.t1 | 1 | 1 | EAP30 | 6 | 217 | 0.0 | 212.5 | 0.0 | 0.0 | 212.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_378.1_27323.t1 | gi|524900426|ref|XP_005106633.1| | PREDICTED: vacuolar-sorting protein SNF8-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_378.1_27323.t1 | gi|676472658|ref|XP_009059561.1| | hypothetical protein LOTGIDRAFT_234160 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_378.1_27323.t1 | gi|533160859|ref|XP_005394282.1| | PREDICTED: vacuolar-sorting protein SNF8 [Chinchilla lanigera] | 0.0 |
| pfu_aug2.0_378.1_27323.t1 | gi|512928161|ref|XP_004906115.1| | 0.0 | |
| pfu_aug2.0_378.1_27323.t1 | gi|640808237|ref|XP_008060640.1| | PREDICTED: vacuolar-sorting protein SNF8 [Tarsius syrichta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_378.1_27323.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_378.1_27323.t1 atgccactcagaaaagctggtatagctgcaataaaacataaagatgttgcacaggcaaaatttaaagacaaaggcacagc tttggcagaggatcagtttacacagatgaccaaacagatggagatgtttaaagtaaacttggaagaatttgcatcgaacc acaaagacgatattcgtcgggaccccgccttcagagttcaattccaggagatgtgtgcttccataggggtggatccattg gcgtccagtaaaggattctgggccgagatgctgggagtaggagatttttattatgaattaggagtacagattatagaagt ctgtctagcaacaagtcatcaaaacggaggtttgataggaattgaagaactacgagacaaagtgatgaaatccagaggga aaaaatctcaagaagttagtttagatgacctgctaagggccattaagaagttgaaggtattaggaaatggttttacggta atccctgtcggaaagacgtacatggtccagagtgtaccgggggaacttactatggatcatactaacctactacagcaagc tcagagtacaggtcacgtgaccaagtcacaattaatgaaggacctgaagtgggaggaagaacgggcgtcgagagctctga tgttcatggtgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaagaagga ttggtatgggtggatgaccaggcccctggggagagggagtactggttcccaagcttctctccagacgtcgctgccgcatc ctgagtatatgtgcacttatgattaa |
|
Protein
| Protein ID | pfu_aug2.0_378.1_27323.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_378.1_27323.t1 MPLRKAGIAAIKHKDVAQAKFKDKGTALAEDQFTQMTKQMEMFKVNLEEFASNHKDDIRRDPAFRVQFQEMCASIGVDPL ASSKGFWAEMLGVGDFYYELGVQIIEVCLATSHQNGGLIGIEELRDKVMKSRGKKSQEVSLDDLLRAIKKLKVLGNGFTV IPVGKTYMVQSVPGELTMDHTNLLQQAQSTGHVTKSQLMKDLKWEEERASRALMFMVXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXKKDWYGWMTRPLGRGSTGSQASLQTSLPHPEYMCTYD |
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