Gene
| Gene Model ID | pfu_aug2.0_378.1_27326 |
|---|---|
| Locus | scaffold378.1 : 322089 ... 341460 : + |
| To GenomeBrowser | scaffold378.1:322089..341460 |
| Genes list of scaffold | scaffold378.1 |
| Synonym | pfu_aug1.0_3361.1_08601 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_378.1_27326.t1 | 2 | 1 | GON | 1 | 124 | 9.9e-26 | 90.8 | 8.4e-27 | 3.1e-23 | 82.6 |
| pfu_aug2.0_378.1_27326.t1 | 2 | 1 | WSC | 140 | 218 | 2.1e-19 | 69.2 | 5.7e-23 | 2.1e-19 | 69.2 |
| pfu_aug2.0_378.1_27326.t1 | 2 | 2 | GON | 231 | 251 | 9.9e-26 | 90.8 | 0.00028 | 1.0 | 9.1 |
| pfu_aug2.0_378.1_27326.t1 | 2 | 2 | WSC | 270 | 309 | 2.1e-19 | 69.2 | 4.0 | 15000.0 | -9.0 |
| pfu_aug2.0_378.1_27326.t1 | 1 | 1 | Laminin_G_3 | 367 | 420 | 1.8e-07 | 31.4 | 1.5e-10 | 5.5e-07 | 29.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_378.1_27326.t1 | gi|676493726|ref|XP_009066331.1| | hypothetical protein LOTGIDRAFT_169789, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_378.1_27326.t1 | gi|699238400|ref|XP_009857433.1| | PREDICTED: uncharacterized protein LOC101242430 [Ciona intestinalis] | 2.0e-24 |
| pfu_aug2.0_378.1_27326.t1 | gi|685423029|ref|XP_009230368.1| | copper radical oxidase [Gaeumannomyces graminis var. tritici R3-111a-1] | 1.0e-15 |
| pfu_aug2.0_378.1_27326.t1 | gi|596695869|ref|XP_007281629.1| | copper radical oxidase [Colletotrichum gloeosporioides Nara gc5] | 5.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_378.1_27326.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_378.1_27326.t1 atgaagggaagcactccaacagagtatctgacattgagagcgggaattgaaaaaaattatgcctcatactacagtcaatt gggtatgacaacaagatgtgctaattttcatccagtacagtcatattcagccggtggtagtactaagtataaaaaagtcc gtttagacgtacgtacgttcatgatcaacacctcggatacaaggttcacacaacaaagtggaggttcaaataaaattaga tttgccaatgccggggataaatatgccagttcggcacagtgtcagatcatggggcattttaagacagactttgccggcac accttttgtagtctcccctagtgtacagtggacatggactggaaagtttgtacgaggatcacagacaactggagtcgcac acatcacaaattcaacttacattggatgttttgtggatgccagtgatagactgctgccctctgccttcacagacagcaaa cagatgaccgtggaatactgtactaattactgcaatggaaggggatttaagtacgctggagtacaattttactcccagtg tttttgtggagataactatctgaagcatatccaaacagcaaacacggcctgtaacacgccctgccggggaaaccccgccc aaaaatgtggaggaacatggagaatctctgtttacggaactggtcttccacaagcgatcgcagggaagtgtggcggatac ccaggccaatgcttccctgcgttaaaatccaacccacaaatggaggctctcgctgtacaaatcatctctactcatccatg tctgaacaatccgtgtaaatatgagggtaaatgtgtcgccatcactgccagtgacttcagatgtgtttgtcacgacggat attcaggaacgctatgtgacagaccaaaagaaagcataatacttggtggagcagcctgtccgcccggaatgcaagcagaa aaatgtaattgtgccaaacgaacttgtactggggcaaaatttgttggtgacaactgtgtcacacccacgggtctgacaat catcggaggagtgggtgcctgtaaagatttcggaatctatcacttccaaactttctgggcatactataaaggtgtggatg actcctgcacaaggggaattaactctggcgtgcagatcgtagtcggtgaatggtatttggtggcagtggtgggcaacaat actcacatcacgttctacgtaaacggaaaggctcagtcagtttccagtgatgctctgaatgggggcttggtcggccactg ggagcttggcgagagtttacctcccctttgtaaaggtacggaccatggcggggcagactggataccagctgacggagatg tcttgacaggtgtacattgtaacatcagcaggttctacattccgcgtgacgttagcgttttggtcaaaccatacaaaaga ggcggcaacagcggtggactacttgacatactagcccag |
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Protein
| Protein ID | pfu_aug2.0_378.1_27326.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_378.1_27326.t1 MKGSTPTEYLTLRAGIEKNYASYYSQLGMTTRCANFHPVQSYSAGGSTKYKKVRLDVRTFMINTSDTRFTQQSGGSNKIR FANAGDKYASSAQCQIMGHFKTDFAGTPFVVSPSVQWTWTGKFVRGSQTTGVAHITNSTYIGCFVDASDRLLPSAFTDSK QMTVEYCTNYCNGRGFKYAGVQFYSQCFCGDNYLKHIQTANTACNTPCRGNPAQKCGGTWRISVYGTGLPQAIAGKCGGY PGQCFPALKSNPQMEALAVQIISTHPCLNNPCKYEGKCVAITASDFRCVCHDGYSGTLCDRPKESIILGGAACPPGMQAE KCNCAKRTCTGAKFVGDNCVTPTGLTIIGGVGACKDFGIYHFQTFWAYYKGVDDSCTRGINSGVQIVVGEWYLVAVVGNN THITFYVNGKAQSVSSDALNGGLVGHWELGESLPPLCKGTDHGGADWIPADGDVLTGVHCNISRFYIPRDVSVLVKPYKR GGNSGGLLDILAQ |
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