Gene
| Gene Model ID | pfu_aug2.0_38.1_26710 |
|---|---|
| Locus | scaffold38.1 : 159950 ... 185758 : + |
| To GenomeBrowser | scaffold38.1:159950..185758 |
| Genes list of scaffold | scaffold38.1 |
| Synonym | pfu_aug1.0_34111.1_55489 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_38.1_26710.t1 | 1 | 1 | TIR_2 | 136 | 237 | 1.2e-06 | 28.6 | 1.5e-10 | 2.2e-06 | 27.7 |
Transcript
| Transcript ID | pfu_aug2.0_38.1_26710.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_38.1_26710.t1 atgtcatcaccaaataagccaccccctggttcaaggcaggactccctctccagtaactcactatctcctgatgctgagcc atggaacatcacccctagtcaccctctagatacaacaggtaggaggaaccaccctagtggtgctatacccagaaattacc agagaggtagtcaaggggattgtgtgtcatctccgtcatctacagcttatggaaacattcagccagaaaacagaggagga tcatcagagatcgtgactggagcatcgcgtggtgactgtcaaaataaaatatcgagcgatgattacgaaaccagcccaca tcaaaccactaaagaagctatgcaggcagttattgataagtatagagacttgatgccgccagaactccaagtagagtatt acgatgtgatgattctatatagtgaagaggaccgggaggctgctgaggaatacaaaaggcatctcatggaggaaataatg ctggaaaaaggacatagagtcaaagctgtgttatatgatgaccaggaaatggtctcgttggccggctcaaaaatcaaggg cttggaaaaaagctttcagagatgtacttttgctttcgttttcttaaccaaagcattttgtgaatgtgaatggtgtgcgt tctcaagtgaggagtgtcttatggaggctatttacaatcctcaaaaaaagtggtgtgtggtacctgtttatacagtacag agaaacaaggcagatttcaaaatccccatgggactgaactctttaaaaggagtgaattattataataacgatcagtttta tcagagaggtctaaagcgtctgataggtgataagttacatgtaagaatcaatagtgaacgcaaacattttgaaaatcagt atgaatgggcttgtgaagagagaaacaagcaagaaatattggaagttaaaaggcaacagctgatagaaagaaaagaaaga caaaatcaagaaatgcgtcggatgatgcactcccactcaaacccgggtaatttaacagaacattcagaaaagactgattc ctattatttgcagaagataatgagatctaaaagtgaacatttcaaatctttgtctgctctcgaagaatctcattctattc tatcaaagccagaaagtgcttatgcaagcctgtcagcaaaaagcacagtaacagaacattccatgcgtcaacccagcgaa ggtgatgatggctgtcattttagtcttgacgattcaccatcgctggataacggaccacgatcaactgatagtggtttaag tgttgatgcagaattacccaattatggtacttcaacaaatacatctccgtaccaccagcaaaaactaacatctacacaac atacttcaaggactccaaatactccaagtactagtattgtagttcatgagcaccatcattactatgagcctcagccaaat cctactcaggctactgtgattaactataatatagagggagcctctaatgttgtagtgggtaaaggtggcaccattatatc aggatctacatctgaggagtctgttgtgatagaggataatacacgcccaaaacaaagttgcacgtctcctgtaagagacc cctctactagtattccctttgttagcagaccagtgagtagaccttccatagactctcctacaagtaagacttctaagcat gattctcaacagacagaaggcaaaactttcacagataacaagagaaacgataaagacactgattctcaattattgattaa acgaggagtaagaccagtgtgtagtgtgacatcaacaaatacaacagaaaaagatatggcaccatcatcgtcaccgtcat caggggtaccactagacatcaagaaagtggcgcaagtttcacctatgccaagaggcgctagaaatcgttcacctgattca caaacatcattaaaaactaccaaagaccctgtacctactgaaacacatcctcttgatgatgatgaagaagaaacaggtgt gaaaggagtccggaatgaagattttcatgaaaccaaactaaaacctgtagacaatcagtatcgtgaaaatccttatgaag gagagcaatttcttgattctcaaacagggtgtaaagtagtgtctagcggctctgtgggtaggactcctgaggtagagaca actctacccctcagtagatctagtaaggagaaacagactagtgaattatataagtcagattgtaggttaagtgaaacaag cctggaaacagattcaggggaagttacgggagaggcaaggattgaccaaagagacagaacccttgcttcgcgttgcagtg acacccctgaaggctttgtgaaagtgagttatggcacagattcatattcaggcacagatgtagatgtcaaaggtctaaca gcagaagaaaaaaaattaagtgttgtttcaaaaacccttgagatgggatttggagaatatcaagttaaaagtgcattaga aaaattaaaaagggaagagccaggtcatgtaaaattaattgtggatgatctagtcaatgaaatagttacgatgactgaag ttccgccaacggaccatgccagaggacatcaacatagacaggaaaatgtgaggggcagggaaggtcctggtaggaatcgg tctcgaagagattcaaatgacagtgcacaacagagtgagggaattctttccaagatgaaaaaattattcaatagaaaatg a |
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Protein
| Protein ID | pfu_aug2.0_38.1_26710.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_38.1_26710.t1 MSSPNKPPPGSRQDSLSSNSLSPDAEPWNITPSHPLDTTGRRNHPSGAIPRNYQRGSQGDCVSSPSSTAYGNIQPENRGG SSEIVTGASRGDCQNKISSDDYETSPHQTTKEAMQAVIDKYRDLMPPELQVEYYDVMILYSEEDREAAEEYKRHLMEEIM LEKGHRVKAVLYDDQEMVSLAGSKIKGLEKSFQRCTFAFVFLTKAFCECEWCAFSSEECLMEAIYNPQKKWCVVPVYTVQ RNKADFKIPMGLNSLKGVNYYNNDQFYQRGLKRLIGDKLHVRINSERKHFENQYEWACEERNKQEILEVKRQQLIERKER QNQEMRRMMHSHSNPGNLTEHSEKTDSYYLQKIMRSKSEHFKSLSALEESHSILSKPESAYASLSAKSTVTEHSMRQPSE GDDGCHFSLDDSPSLDNGPRSTDSGLSVDAELPNYGTSTNTSPYHQQKLTSTQHTSRTPNTPSTSIVVHEHHHYYEPQPN PTQATVINYNIEGASNVVVGKGGTIISGSTSEESVVIEDNTRPKQSCTSPVRDPSTSIPFVSRPVSRPSIDSPTSKTSKH DSQQTEGKTFTDNKRNDKDTDSQLLIKRGVRPVCSVTSTNTTEKDMAPSSSPSSGVPLDIKKVAQVSPMPRGARNRSPDS QTSLKTTKDPVPTETHPLDDDEEETGVKGVRNEDFHETKLKPVDNQYRENPYEGEQFLDSQTGCKVVSSGSVGRTPEVET TLPLSRSSKEKQTSELYKSDCRLSETSLETDSGEVTGEARIDQRDRTLASRCSDTPEGFVKVSYGTDSYSGTDVDVKGLT AEEKKLSVVSKTLEMGFGEYQVKSALEKLKREEPGHVKLIVDDLVNEIVTMTEVPPTDHARGHQHRQENVRGREGPGRNR SRRDSNDSAQQSEGILSKMKKLFNRK |
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