Gene
| Gene Model ID | pfu_aug2.0_38.1_26713 |
|---|---|
| Locus | scaffold38.1 : 210900 ... 233349 : + |
| To GenomeBrowser | scaffold38.1:210900..233349 |
| Genes list of scaffold | scaffold38.1 |
| Synonym | pfu_aug1.0_8394.1_09754 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_38.1_26713.t1 | 1 | 1 | DUF2356 | 245 | 473 | 0.0 | 357.9 | 0.0 | 0.0 | 356.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_38.1_26713.t1 | gi|524868556|ref|XP_005091080.1| | PREDICTED: integrator complex subunit 3-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_38.1_26713.t1 | gi|524868554|ref|XP_005091079.1| | PREDICTED: integrator complex subunit 3-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_38.1_26713.t1 | gi|241742595|ref|XP_002412393.1| | integrator complex subunit, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_38.1_26713.t1 | gi|33243989|gb|AAH55344.1| | Integrator complex subunit 3 [Mus musculus] | 0.0 |
| pfu_aug2.0_38.1_26713.t1 | gi|148683194|gb|EDL15141.1| | integrator complex subunit 3, isoform CRA_a, partial [Mus musculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_38.1_26713.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_38.1_26713.t1 atggaacaaaccaataaagtgccacagtcaaggctgattgggacatctgtattggaatctaaggatgatttaaatgagcg attggaaaaatgctacaatacagtgaataatattttgaatggactttcagaaagagaagctaatgatgctttgaattctt atgtttgtcgaggtgcacctcagcatgaagaagtacagcttgggttgttgtatagtatactggtggatccaaaggcggct gcaaagacttaccgagatttgagtctggtaagcagagatgccttgaacctagtgcaaacacgaacaaaccaacttatctt tgagaagtggctgaaacttctagacaatgtgcgatcacaaatcatttggctgtgtaaggagttgatcaagagtggggtgg caggagcagaagtagtttgtcataacttacttagacagattgctggtggtgatatttcacctaaaaatgtatggttgaca gaggcattattggatgttcttgtagagagcaggccctggctggacaagtttccttctctgatgtccaatgttgtgttcac atatctacgagttattgtagatcataatggacaagtatatgccaatctcaggcagagagaggtcgatttctgcatatcat tattgcgagaaaagtggtcagactgtcaggccattggacgagatttagtcagacttttacagaacgtagccaggatacca gaatttgacagattatggaaggatataatgctgagtccatcctccctatcccctacatttactggtgttcagcagttaat gcagacaaggacttcccggaagttcctcattaccagactgactccagatatggaaagcaaactggttttcctcataacta aggtcaagtttgggcaacataaaagataccaggactggtttcaaagacagtatttgtctacaccagagagccagtcccta cgatgtgatctcattcgttatatatgtgctgtatttcacccgcctaatgagctgctgtgttcagagataattccacgttg ggcagtcattggatggcttctaaccacctgcacatccaatgtagctgccacgaatgctaaattagcactgttctatgatt ggttattttttgacccagaaagagacagcataatgaatatagaacctgccattctagtgatgttccattcaatacggcca catcctgccattacagctacacttctagattttctctgtaggattatgccaaatttttgtttgccccttcaagctcaggt tcggaatggaattttcacatccctcaaaatcatactagagaagagagttttgcagtctctttcacctctttttgacaatg ttaagcttgatacagaactcaggaatctgatcagggaaaacttcagtgaattctgttctccagaagtagtgaaagaggat gttgtgaacaacaaggaggtgatagaccttgacacagataaccatcttgacaacaatttatctgatgcagcattcagtga tgaagaggatgatataccactagacaaaattcggcaagacaacaaattccaaccaatcagagatactcgctatcagccaa ttaaccttgatgaatatcttgaacagcttggaggaggggatatacagaagtatacagaggaactacgggatgaaaaagac caggaaattcagtgtgaagtgatggatcgactcttacagatgatgcttagagaggatgagtttgaccaggatctggccgt cccactatctgcctgtctatgtcagatactcagtacgcaattcaacaacaatctgttccctcaagaactggatgaagaat ctcttgaggaatcagtgggatcaccactctacgttatgttcagatttttgacgacaataccagaggaggatccaaatcgt attcccattttaacattactaggagaaatgtatacacggcaagctcgtataggatatcatcttctctactttatcaaagt tgggaaagtgaatgatgagaaaatgaacacatacagagatttttgcaagagtcttgacaacaaagacttggagtcttgtc taataagcgatttaaagctatgtcaggaagatgatgttaggttgtttacattcttggtgcctgatatatatacaaatttt tccaatatagctattggtaatgcagagctacttcaaatgattgtatcagcaattgatggaactcagctccaggagttgat ctgccagatattacagggtcatctcatcatgttccgcaaagattcctttctctcagtgttaaatgctagtttagactggg agacattagaacaatattttctgtggcagttaatagctgctcacaatataccggtggactatgtgatgccagtcctccct aaactggactttacctcacatgcagaggcactctcgagcattttagttcttctaaagcaagaatgtccttctccagatct gatcagaccagtgctttgtagagaatgtaaaagaactgattattttgctgtgtctatactgaaatactgggctcaagaat atgaagataaattagcagaacttatcctatctcaggttaccaagttaaatggaacaccaaagaaaagacagaggacttct tcgtcaaagaaggacaatgtcagtgtggagcaaatcctcggccatctagatcacatgagacaagtctgtaaaaatatatc atttttaaacaatgagaacattcagcatgcccttcagtctgtgcagcagtcagcaagtgaatctctcaaatcaaaattta gtgatttattggccttggctgatgacattgaatcagattacaagtccactcgggttttacgaggattacctgtccgtaag gcagccagtgctagtgcagctatgggtctcgacggcagaacgtcacgcaaaaacaataagaaaaacgtccaagaagaaag ttcatcagaaactgatagtagtgaggatgaggaaattaaaccaaaagccaagcgacggaaaaaagtgttaccagttgatg aagatagtgactga |
|
Protein
| Protein ID | pfu_aug2.0_38.1_26713.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_38.1_26713.t1 MEQTNKVPQSRLIGTSVLESKDDLNERLEKCYNTVNNILNGLSEREANDALNSYVCRGAPQHEEVQLGLLYSILVDPKAA AKTYRDLSLVSRDALNLVQTRTNQLIFEKWLKLLDNVRSQIIWLCKELIKSGVAGAEVVCHNLLRQIAGGDISPKNVWLT EALLDVLVESRPWLDKFPSLMSNVVFTYLRVIVDHNGQVYANLRQREVDFCISLLREKWSDCQAIGRDLVRLLQNVARIP EFDRLWKDIMLSPSSLSPTFTGVQQLMQTRTSRKFLITRLTPDMESKLVFLITKVKFGQHKRYQDWFQRQYLSTPESQSL RCDLIRYICAVFHPPNELLCSEIIPRWAVIGWLLTTCTSNVAATNAKLALFYDWLFFDPERDSIMNIEPAILVMFHSIRP HPAITATLLDFLCRIMPNFCLPLQAQVRNGIFTSLKIILEKRVLQSLSPLFDNVKLDTELRNLIRENFSEFCSPEVVKED VVNNKEVIDLDTDNHLDNNLSDAAFSDEEDDIPLDKIRQDNKFQPIRDTRYQPINLDEYLEQLGGGDIQKYTEELRDEKD QEIQCEVMDRLLQMMLREDEFDQDLAVPLSACLCQILSTQFNNNLFPQELDEESLEESVGSPLYVMFRFLTTIPEEDPNR IPILTLLGEMYTRQARIGYHLLYFIKVGKVNDEKMNTYRDFCKSLDNKDLESCLISDLKLCQEDDVRLFTFLVPDIYTNF SNIAIGNAELLQMIVSAIDGTQLQELICQILQGHLIMFRKDSFLSVLNASLDWETLEQYFLWQLIAAHNIPVDYVMPVLP KLDFTSHAEALSSILVLLKQECPSPDLIRPVLCRECKRTDYFAVSILKYWAQEYEDKLAELILSQVTKLNGTPKKRQRTS SSKKDNVSVEQILGHLDHMRQVCKNISFLNNENIQHALQSVQQSASESLKSKFSDLLALADDIESDYKSTRVLRGLPVRK AASASAAMGLDGRTSRKNNKKNVQEESSSETDSSEDEEIKPKAKRRKKVLPVDEDSD |
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