Gene
| Gene Model ID | pfu_aug2.0_38.1_26715 |
|---|---|
| Locus | scaffold38.1 : 335080 ... 341283 : + |
| To GenomeBrowser | scaffold38.1:335080..341283 |
| Genes list of scaffold | scaffold38.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_38.1_26715.t1 | 2 | 1 | V-set | 8 | 61 | 2.2e-09 | 37.2 | 3.5e-06 | 0.0074 | 16.1 |
| pfu_aug2.0_38.1_26715.t1 | 3 | 1 | I-set | 20 | 55 | 1.2e-17 | 63.4 | 1.4e-07 | 0.0003 | 20.5 |
| pfu_aug2.0_38.1_26715.t1 | 2 | 1 | ig | 25 | 53 | 4.5e-09 | 36.3 | 3.4e-06 | 0.0072 | 16.4 |
| pfu_aug2.0_38.1_26715.t1 | 2 | 1 | Ig_2 | 27 | 56 | 3.0e-12 | 46.4 | 3.8e-05 | 0.08 | 13.0 |
| pfu_aug2.0_38.1_26715.t1 | 2 | 1 | Ig_3 | 36 | 53 | 5.3e-09 | 36.4 | 0.014 | 30.0 | 5.2 |
| pfu_aug2.0_38.1_26715.t1 | 3 | 2 | I-set | 72 | 88 | 1.2e-17 | 63.4 | 1.1 | 2400.0 | -1.6 |
| pfu_aug2.0_38.1_26715.t1 | 2 | 2 | Ig_3 | 83 | 165 | 5.3e-09 | 36.4 | 6.3e-10 | 1.3e-06 | 28.7 |
| pfu_aug2.0_38.1_26715.t1 | 2 | 2 | Ig_2 | 88 | 175 | 3.0e-12 | 46.4 | 7.2e-11 | 1.5e-07 | 31.4 |
| pfu_aug2.0_38.1_26715.t1 | 3 | 3 | I-set | 90 | 172 | 1.2e-17 | 63.4 | 6.8e-14 | 1.4e-10 | 40.8 |
| pfu_aug2.0_38.1_26715.t1 | 2 | 2 | V-set | 90 | 171 | 2.2e-09 | 37.2 | 3.6e-07 | 0.00075 | 19.3 |
| pfu_aug2.0_38.1_26715.t1 | 2 | 2 | ig | 95 | 164 | 4.5e-09 | 36.3 | 2.1e-06 | 0.0046 | 17.0 |
Transcript
| Transcript ID | pfu_aug2.0_38.1_26715.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_38.1_26715.t1 atgtttattgtgtcttcgacaaaaacgtcagaaataaagaagtacgtgttcaccaatgatgacaagatcagaatcgaaca tgaatttgaatctcaagactggcgtctcatcatatcaaacgttcaaaagaccaacgcaggagagtacgaatgtcaagtgg catcacgtgacatctctttcaggcagcaattctacctcaatgtattagatgcagtatctgataagaagcactatgtagta gaagcaatcaacatctacggacctgagcatgtgaatacgggagaatctttcgaagtgcattgtaacgcaacgggtgttga tttcccaccagatgaaatagactggtttataaatggttttaaaatcaaaacagactttgatagaggtgttatcatggaca aatccgtatcactaaaaacaaagagcatagagagcacgatacatatcgagcatgcccggatggaggacgccggtgactat acgtgtagggtatccacaggactggtcaaaactacagaggtcaaggtcctctacatggataagaataacaacagcaaaag agtggataagaataacaacagcaaaagaggtatgttgaagttgcacacaaacatgtacatgtttaaagaagacgtgtaca ttgtacagtag |
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Protein
| Protein ID | pfu_aug2.0_38.1_26715.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_38.1_26715.t1 MFIVSSTKTSEIKKYVFTNDDKIRIEHEFESQDWRLIISNVQKTNAGEYECQVASRDISFRQQFYLNVLDAVSDKKHYVV EAINIYGPEHVNTGESFEVHCNATGVDFPPDEIDWFINGFKIKTDFDRGVIMDKSVSLKTKSIESTIHIEHARMEDAGDY TCRVSTGLVKTTEVKVLYMDKNNNSKRVDKNNNSKRGMLKLHTNMYMFKEDVYIVQ |
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